KEGG   Rhodomicrobium vannielii: Rvan_2213
Entry
Rvan_2213         CDS       T01353                                 
Name
(GenBank) porphobilinogen deaminase
  KO
K01749  hydroxymethylbilane synthase [EC:2.5.1.61]
Organism
rva  Rhodomicrobium vannielii
Pathway
rva00860  Porphyrin metabolism
rva01100  Metabolic pathways
rva01110  Biosynthesis of secondary metabolites
rva01120  Microbial metabolism in diverse environments
rva01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:rva00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    Rvan_2213
Enzymes [BR:rva01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.61  hydroxymethylbilane synthase
     Rvan_2213
SSDB
Motif
Pfam: Porphobil_deam Porphobil_deamC AbiEi_3_N
Other DBs
NCBI-ProteinID: ADP71438
UniProt: E3I377
Position
complement(2427700..2428641)
AA seq 313 aa
MKNHSDARQIRIGTRGSALALAQATEVQNRLAAIYGDEVKFERVVIKTTGDKILDKALSL
VGGKGLFTKELEEALFADQIDIAVHSMKDVQAFLPDGLEIACNLPREDVRDAFISMKAKS
LADMPEGAVIGTASVRREAFIKNKRPDLKTVLFRGNVQSRLKKLEDGVADATLLASAGLN
RLGLSDRITQHIPVEDMLPAPAQGAIGIEIRSNDQVTRELIMALHDEATGYAIDAERAFL
SELDGSCRTPIAALARYDGHGRVSFKGAILTPDGARIYETTREGSANDAAAMGKDAAQEL
YARGGKDVFPPAA
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaaaaatcactcagacgcaaggcaaattcgcatcggtacacgtggcagtgcgctggct
ttggcgcaagctacggaagtacagaaccgcctggccgcgatctatggcgacgaggtcaaa
ttcgagcgcgtcgtcatcaagacgactggcgataaaatcctcgacaaggccttgtctttg
gttggcggcaaggggcttttcaccaaggaacttgaagaggcgctgttcgctgaccagatc
gacatcgccgtccattcgatgaaggacgtgcaggctttcctgccggatgggcttgaaatc
gcttgcaacctcccccgcgaggatgtgcgcgacgcgttcatttcgatgaaggcgaaatcg
cttgcagatatgccggagggcgcggtcatcggcacggcctccgtccgccgcgaagccttc
atcaagaacaagcgcccggacctgaagacggtgctcttccgcggcaacgtgcagtcgcgc
ctcaagaagctcgaagacggcgtggcggacgcgacgctgctggcttccgccgggctgaac
aggcttggcctttccgaccgcatcacccaacatattcctgtggaagatatgctgcccgcg
cctgcgcagggcgccatcggcatcgagatccgctcgaacgatcaggtgacgcgcgagctc
atcatggcgctgcatgacgaggcgaccggctacgccatcgacgccgagcgcgccttcctc
agcgaactcgacggttcgtgtcgcacgccgattgccgcgctcgcccgctatgacggtcac
ggcagggtgtcgttcaagggcgcgatcctcacgcccgacggcgcgcgcatctacgaaacc
acccgcgagggcagcgcgaacgacgcagccgccatgggcaaggacgccgcgcaggagctt
tatgcacggggcggcaaggatgtgttccccccggcggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (5)   
   KEGG MODULE (4)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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