KEGG   Rubrobacter xylanophilus: Rxyl_0808
Entry
Rxyl_0808         CDS       T00368                                 
Name
(GenBank) phage SPO1 DNA polymerase-related protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rxy  Rubrobacter xylanophilus
Pathway
rxy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rxy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rxyl_0808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rxy03400]
    Rxyl_0808
Enzymes [BR:rxy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Rxyl_0808
DNA repair and recombination proteins [BR:rxy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Rxyl_0808
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ABG03776
UniProt: Q1AXV2
Position
842391..843020
AA seq 209 aa
MEFAEAQKEALECTRCGLCQSRTRVVFGEGPLNARLFVVGEAPGHNEDAAGRPFQGASGM
LLEGLLGSVGLSREEVYLTTLVKCRPPGTPPRSPRPSEVSSCRRYLISQLVAVDPKVVVA
LGELPSKILTGRKESLRRIRGRAIPLDGRYVIPTFSLQRALYVPADRALLISDFSRLPEL
LEAERPATYETLNVPSQTAEREPLQPGLW
NT seq 630 nt   +upstreamnt  +downstreamnt
ttggagttcgccgaggcccagaaagaggccctggagtgcacccggtgcggcctctgccag
tcccgcacccgcgtggtcttcggggaggggccgctcaacgcccggctgttcgtcgtgggt
gaggccccggggcacaacgaggacgccgccggcaggccttttcagggggcctccgggatg
ctgctggaggggcttctgggctccgtggggctctccagggaggaggtctacctcacgacg
ctcgtcaagtgccggccgccgggcacgccgccccgctccccccggccctccgaggtgagc
agctgccgccgctacctgatctcccagctcgtcgccgtggacccgaaggtggtcgtcgcg
ctgggcgagctccccagcaagatcctcaccggccgcaaggagtcgctgcggcgcatccgg
gggcgggccatccccctggacgggcgctacgtgatccccaccttctcgctgcagagggcg
ctctacgtcccggcggacagggcgctcctgatctcggacttctcccggctgccggagctc
ctggaggccgagcgcccggccacctacgagacgctcaacgtgccgtcgcagaccgccgag
cgcgagcccctgcagccgggactctggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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