KEGG   Saccharomonospora xinjiangensis: EYD13_02190
Entry
EYD13_02190       CDS       T05928                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
sacc  Saccharomonospora xinjiangensis
Pathway
sacc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sacc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EYD13_02190 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sacc03021]
    EYD13_02190 (rpoB)
   03400 DNA repair and recombination proteins [BR:sacc03400]
    EYD13_02190 (rpoB)
Enzymes [BR:sacc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EYD13_02190 (rpoB)
Transcription machinery [BR:sacc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     EYD13_02190 (rpoB)
DNA repair and recombination proteins [BR:sacc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      EYD13_02190 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 RnfC_N Peptidase_M23
Other DBs
NCBI-ProteinID: QBQ58821
UniProt: A0A4P7C7J2
Position
442595..446086
AA seq 1163 aa
MAVSPANQATAATNSIRSSTGVPGAPKRVSFGEIREPLDTPHLLDVQIRSFEWFTGSEAW
YERAVNEGDENPVGGLEEVLNEISPIEDFSGSMSLSFSDPRFDEVKASVEECKDKDMTYA
APLFVTAEFVNNNTGEIKSQTVFMGDFPVMTDKGTFIINGTERVVVSQLVRSPGVYFDQA
VDKSTDKDVFSVKIIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEQIRE
RFSFSETLLATLEKDHTAGQDEALLDIHRKLRPGEPPTKESAQALVENLFFKDKRYDLAK
VGRYKVNKKLGLKLPYDHGTLTEEDIVTTVEYLVRLHAGEEMMRSGDVEVPVEIDDIDHF
GNRRIRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIREFFGT
SQLSQFMDQNNPLSGLTHKRRLNALGPGGLSRERAGMDVRDVHPSHYGRMCPIETPEGPN
IGLIGSLASYARVNPFGFIETPYRKVIEGKVTDEVHYLTADEEDRFVKAQANAPLTEDGH
FAEDQVLGRRKGGEVELLDPMEIDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQR
QAVPLLRSESPLVGTGVELAAAVDAGDVVVAEEAGVVEELSADMITIMQDDGTRRGYGLY
KFRRTNAGTCFNHRPIVNEGDRVEKGQVLADGPSTDKGEMALGKNLLVAVMPWEGHNYED
AIVISQRLVQDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEDVLADLDERGIVRIG
AEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVF
SREDDDELPPGVNELVRVYVAKKSKIQDGDKLAGRHGNKGVIGKILPAEDMPFLEDGTPV
DIVLNTHGVPRRMNIGQILELHLGWLASQGWKVEGNPEWAKNLTEELMDVEPGTNTATPV
FDGAREHELTGLLGCAKPNRDGDRLVGEDGKATLLDGRTGEPFPYPVAVGYMYILKLHHM
VDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDV
LGRVKVYEAIVKGENMPSPGIPESFKVLLKELQSLCLNVEVLSTDGAAIEMRDSDDEDLE
RAAANLGINLSRNESPSVDDVVQ
NT seq 3492 nt   +upstreamnt  +downstreamnt
ttggcagtctctcccgcgaaccaggccactgctgcgaccaactctattcgatcgtcaacg
ggtgttccaggagcaccgaagcgagtctctttcggggagattcgcgagccgctcgacacc
ccgcaccttcttgatgtgcagatccggtcgttcgaatggttcaccggttcggaggcgtgg
tacgaacgcgccgtcaacgagggcgacgagaacccggtcggtggtctcgaggaggtcctg
aacgagatctccccgatcgaggacttctcgggctcgatgtccctgtccttctccgacccg
cgcttcgacgaggtcaaggcctccgtcgaggagtgcaaggacaaggacatgacctacgcg
gcgccgctgttcgtcaccgccgagttcgtcaacaacaacaccggtgagatcaagagccag
acggtcttcatgggcgacttccccgtgatgaccgacaagggcacgttcatcatcaacggc
accgagcgtgtcgtggtgtcgcagctcgtccgctcgcccggcgtgtacttcgaccaggcc
gtggacaagtccacggacaaggacgtcttcagcgtcaagatcattccgagccgcggtgcg
tggctcgaattcgacgtcgataagcgcgacaccgtgggtgtgcggatcgaccgcaagcga
cgtcagcccgtcacggtgctgctgaaggctctcggctggacgaccgagcagatccgcgag
cgcttctccttctccgagacgctgctcgcgaccctggagaaggaccacacggcaggccag
gacgaggcgctgctcgacatccacaggaagctgcggccgggtgagcctccgacgaaggag
agcgcgcaggccctcgtggagaacctcttcttcaaggacaagcggtacgacctggccaag
gtcggtcgctacaaggtcaacaagaagctcggtctcaagcttccctacgaccacggcacc
ctcaccgaggaagacatcgtcaccacggtcgagtacctggtccgcctgcacgcgggcgag
gagatgatgcgttccggcgacgtcgaggtgcccgtcgagatcgacgacatcgaccacttc
ggcaaccgccgcatccgcaccgtcggcgagctgatccagaaccagatcagggtcggtctc
tcccgcatggagcgcgtggtgcgcgagcggatgaccacccaggacgtcgaggccatcacg
ccgcagacgctgatcaacatccgccctgtcgtggcagcgatccgggagttcttcggaacc
tcgcagctgtcgcagttcatggaccagaacaacccgctgtcgggcctgacccacaagcgc
cgcctcaacgcgctcggccccggcggtctctcccgtgaacgcgcgggcatggacgtccgc
gacgtgcacccgagccactacggccggatgtgtccgatcgagacgccggaaggcccgaac
atcggtctgatcggctcgctcgcctcctacgccagggttaacccgttcgggtttatcgaa
acgccgtaccggaaggtcatcgagggcaaggtcaccgacgaggtgcactacctgaccgcc
gacgaggaggaccgcttcgtcaaggcgcaggccaacgcgccgctgaccgaggacggccac
ttcgcggaggatcaggtcctcggcaggaggaagggcggcgaggtcgagctgctcgacccc
atggagatcgactacatggacgtctcgcctcggcagatggtgtccgtggcgaccgccatg
atcccgttcctcgagcacgacgacgccaaccgcgcactcatgggtgccaacatgcagcgt
caggctgtgccgctgctgcgcagcgagtcgccgctggtcggtacgggcgtcgagctggca
gcagccgtcgatgcgggtgacgtcgtcgtcgccgaggaggcaggcgtcgtcgaggagctg
tccgccgacatgatcacgatcatgcaggacgacggcacccggcgcggctacggcctctac
aagttccgccgcaccaacgcgggcacctgcttcaaccaccggccgatcgtcaacgagggc
gaccgcgtcgagaagggccaggtcctcgccgacggtccctcgacggacaagggcgagatg
gccctcggcaagaacctcctcgtggcggtcatgccgtgggagggccacaactacgaggac
gccatcgtcatctcgcagcggctcgtgcaggacgacgtgctcacgtcgatccacatcgag
gagcacgagatcgacgcccgcgacaccaagctgggcgccgaggagatcacccgcgacatc
ccgaacgtgtcggaggacgtgctcgccgacctcgacgagcgcggcatcgtccgcatcggt
gccgaggttcgcgacggcgacatcctggtcggcaaggtcacgccgaagggcgagacggag
ctgacccccgaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgcgaggtgcgc
gacacgtcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgtccgggtcttc
tctcgcgaggacgacgacgagctgccccccggcgtcaacgagctcgtccgcgtctacgtc
gcgaagaagagcaagatccaggacggcgacaagctcgcgggccgtcacggcaacaagggc
gtcatcggcaagatcctccccgccgaggacatgccgttcctcgaggacggcaccccggtg
gacatcgtgctgaacacccacggtgttccgcgccgtatgaacatcgggcagatcctcgaa
ctgcacctcgggtggctcgcctcccagggctggaaggtcgagggcaaccccgagtgggcg
aagaacctcaccgaggagctgatggacgtcgagccgggcacgaacaccgcgaccccggtg
ttcgacggcgcgagggagcacgagctgacggggctgctcgggtgtgccaagcccaaccgc
gacggcgaccgcctcgtcggcgaggacggcaaggccacgctgctcgacggtcgcacgggt
gagccgttcccgtacccggtcgcggtcggctacatgtacatcctgaagctgcaccacatg
gtggacgacaagatccacgctcgttccaccggcccgtactcgatgatcacgcagcagcct
ctcggtggtaaggcgcagttcggtggtcagcgcttcggtgagatggagtgctgggccatg
caggcgtacggcgccgcctacaccctccaggagctgctcacgatcaagtccgacgacgtg
ctcggcagggtgaaggtctacgaggccatcgtcaagggcgagaacatgccgtcgccgggc
atcccggagtcgttcaaggtgctgctgaaggaacttcagtcgctgtgcttgaacgtcgag
gtgctctccaccgacggggccgccatcgagatgcgcgactccgacgacgaggacctcgaa
cgcgctgccgccaacctcggcatcaacctgtcccgcaacgagtcgccctccgtggacgac
gtcgtgcaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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