KEGG   Sulfodiicoccus acidiphilus: HS1genome_0704
Entry
HS1genome_0704    CDS       T05813                                 
Name
(GenBank) hypothetical protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
sacd  Sulfodiicoccus acidiphilus
Brite
KEGG Orthology (KO) [BR:sacd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sacd03400]
    HS1genome_0704
DNA repair and recombination proteins [BR:sacd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HS1genome_0704
    Archaeal homologous recombinant proteins
     HS1genome_0704
SSDB
Motif
Pfam: SMC_N AAA_15 AAA_21 Rad50_zn_hook AAA_29 SbcC_Walker_B AAA_27 ABC_tran GAS DZR_2 RsgA_GTPase NPV_P10
Other DBs
NCBI-ProteinID: BBD72315
UniProt: A0A348B2B3
Position
complement(687610..690213)
AA seq 867 aa
MKIASVKLVNFLSHEDTLVRFSEGVNVIVGQNGAGKSSVVDAILFALFRTPSRGGIGELL
RRGTRRGLVELSMFEGDVTYKVRRELTSNNPQDLLMRNNEPIHRSARGVTAGIRDLLKVD
ENVLTSTVFVRQGRIEDVFDSLGEVMTFLLRLDRIEKLVSTNGPIRALQQKVEADLKIAE
ERMKRREELTRRRKDLEVQLSKGEEELMVSESELREVRRTLDDYRKKRDTLLGLQSKYVT
LSSDVERLLKKISELEVELSEVKTSLPSDEKIEALRRKVEELSKVNELKLKLQNFKNLED
AGSTLSSQLRTLKTQLSNLEVRAARRVQLEAKARQYEELREALNKLNGEYMEYTRLEAAL
KQLEEKEKTTSAVAERLSTELESMPGEREISSEISNLRERESELSSELKYLYTKRNELKE
RLSKIRGEVCPVCGRPLDEEHKRRLKSEAEDELLSLDAREVELNDELSWTRARVKELEKQ
REKVSVLLNQLQSSKAELELVLKRKREISDQMEKLEPLAKKFEELSSKEKELRAIHDEFL
RLSDSTEEEVQRVKRQVEALEMKLRDNLAKQEGLKSELQGIDERYVEMMERELRNAQTQL
DRLQELKQRAYLLSQSVEDYRRQLEVKEEELRSLNYTPLELEKVKEEVARLEERERKLTE
VTFSLRGQNEERRRELGQISEELRNLEVAAEDVKRLRVAYERLNRLRTVLGQSKLKGYLI
TRAKDILDYHLNSVVKEFNLGFSNFEVVNDDGKFSVRAYRPDRQWVDVRALSGGERVALA
ISLRLALARMASQEIGFMVMDEPTIHLDESRRSELVDIVRNAVSIVPQLIVVTHDRELET
AGDNIIEVVNDGRSKVLERRPQEARFE
NT seq 2604 nt   +upstreamnt  +downstreamnt
ttgaaaatagcgtctgtgaagctggtcaacttccttagccacgaggacacgctggttcgg
ttctctgagggtgtaaacgtcattgtcggccagaacggagcgggaaagagcagtgtggtt
gacgccatacttttcgccctctttaggacacctagtaggggaggtataggcgagctattg
aggcgaggaaccaggagaggtctagttgaactctccatgtttgagggggacgtcacgtac
aaagtcaggagggagctgacaagcaacaaccctcaagacctcctcatgagaaacaatgaa
cctattcacaggagcgctagaggagtgaccgcagggattagagaccttttgaaggtcgat
gagaacgtactaacctctacggtgttcgtcagacaaggaagaatcgaggacgtcttcgat
tcgttgggggaagtgatgacattcttgttgagacttgatagaatagagaaactcgtctca
actaacggtcccataagagctctgcaacagaaggttgaggcggacttgaaaatagcagag
gagaggatgaagagacgagaggagttgactagaaggcgcaaggatctcgaggttcaactg
tctaagggagaggaggagttaatggtcagtgagagtgagctccgagaagtacgtagaact
ctcgacgattacaggaaaaagagggacactctcctcggcctacaaagcaaatacgtcaca
cttagtagcgacgttgaaagactactcaaaaagatctccgaactcgaagttgagttaagt
gaagtcaagacctccctccccagcgacgagaagatagaggcactcagaagaaaagtagaa
gagttgagcaaggttaacgagcttaagctgaagctacagaacttcaagaacttggaggac
gctggttccaccctcagttctcagcttaggacccttaagacccaattgagcaacttagag
gttcgggcagctagacgagttcaactcgaagctaaagcccgtcagtacgaggagttgaga
gaggcgctcaataagctcaatggagagtacatggagtacaccagactagaggccgccctt
aaacagttggaggagaaggagaaaactacctctgctgttgcggagaggttgtcgaccgag
ctcgagtctatgcctggagagagggaaatttcaagtgaaatttcgaatttaagagagcgg
gagtcggaactttccagtgagctaaagtacctatataccaagagaaatgagctaaaggag
aggctatctaagataaggggggaagtctgtccagtctgcgggaggcccctagatgaagaa
cacaagaggagattgaagtcggaagcagaggacgagttactatcgttggacgccagggaa
gttgaactgaacgacgagctttcctggacccgggccagagtgaaggaactcgagaagcag
agagaaaaggtctctgtccttctcaatcaacttcaaagctctaaggcagagcttgagctc
gtattgaaaagaaaaagggaaataagcgaccaaatggagaaactcgaacctctagcgaag
aagtttgaggaactttcctccaaggaaaaggagctaagggcaattcacgacgagttcttg
aggttgtccgactccactgaggaagaagtccagagagtgaagaggcaggtggaagcgctc
gagatgaaattgagggacaacctagccaaacaggaagggttgaaatcggaattgcagggg
atagatgagcgatacgtagaaatgatggaacgcgagctgaggaacgctcagacgcaatta
gataggctacaggagctaaaacagagggcttacctattgagtcagtctgttgaggactac
aggagacaactggaagtcaaggaagaggagctaagatccctcaactacactccactggaa
ctagagaaggttaaagaagaggtggctaggttagaagaaagggagaggaagctcacggag
gttaccttcagtctccgtgggcagaacgaagagcgaaggagagagctaggccaaatttca
gaggaacttcggaacctagaggtggccgctgaagacgttaagaggttgagggttgcgtat
gagaggctgaacaggttgaggacagttctaggtcaaagcaaactcaagggatatctgata
accagagccaaggacattttagattaccatcttaactctgtagtcaaggaattcaatcta
gggttctccaacttcgaggtagtgaacgatgacgggaagttcagcgtcagagcctataga
cctgataggcagtgggtggatgtgagggctctcagtggaggcgagagagtggcactggcg
atatccttgagactggcacttgcaagaatggcgtcacaagagataggattcatggttatg
gacgagcctactatacacctagatgaatctaggaggagcgagttggtggatatagtgagg
aacgcagtgagtattgtacctcaactcatagtggtcacacacgatagggaattggagacg
gcgggggacaatataatcgaagtggttaacgacggcaggagcaaggttttggaaaggagg
ccacaagaggcgaggtttgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (18)   

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