KEGG   Allosaccharopolyspora coralli: GIY23_17585
Entry
GIY23_17585       CDS       T06288                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sace  Allosaccharopolyspora coralli
Brite
KEGG Orthology (KO) [BR:sace00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sace03032]
    GIY23_17585
   03036 Chromosome and associated proteins [BR:sace03036]
    GIY23_17585
   03400 DNA repair and recombination proteins [BR:sace03400]
    GIY23_17585
DNA replication proteins [BR:sace03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GIY23_17585
Chromosome and associated proteins [BR:sace03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    GIY23_17585
DNA repair and recombination proteins [BR:sace03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      GIY23_17585
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QGK71091
UniProt: A0A5Q3Q8U1
Position
complement(3777204..3777962)
AA seq 252 aa
MNKAQLIEALAERLGDKKTASEAVEGVVDLIVRNVNKGEKVNITGFGVFEKRARAARTAR
NPRTGESVKVKKTNVPAFRPGTQFKEVIGGSRKLPRASASKTGARTTTTRAAAGTRSSAK
STAKPASTKSTGTRSTAKTAATKTASTRSTAKTGTSKASTAKTGTSKASTAKASTAKSTS
KAGTKSAAPKASTSRSTKAAPKTTAKASTAKKSTSTAKSGGAKAAPKTATKSTTAKTTRP
AAKTTTRKTTKK
NT seq 759 nt   +upstreamnt  +downstreamnt
gtgaacaaagcccaactcatcgaggccctcgcggaacgcctcggcgacaagaagaccgcg
agcgaagcggtggaaggcgtggtggacctcatcgtccgcaatgtcaacaagggcgaaaag
gtcaacatcaccggcttcggtgtcttcgagaagcgtgcccgtgccgctcgcacggcccgc
aacccccgtaccggcgagtcggtgaaggtcaagaagaccaacgttcccgcattccgcccc
ggcacccagttcaaggaagtcatcggcggttcccgcaagctgccgagggccagcgcttcc
aagaccggtgcgcggacgaccacgacccgtgccgccgcaggaactcgcagctcggcgaag
tcgaccgccaagcccgcttcgaccaagtccacgggcacgcgttcgacggccaagaccgct
gcgacgaagaccgcgtccacccgcagcacggcgaagaccggcacgtcgaaggcgagcacg
gcgaagaccggcacctcgaaggcgagcacggcgaaggccagtaccgcgaagagcacgtcc
aaggcgggcacgaagtcggccgcgccgaaggccagcacgtcgcggagcacgaaggccgcg
ccgaagacgaccgccaaggcgagcacggccaagaagtcgacgagcacggcgaagtccggt
ggtgcgaaggcggctccgaagaccgccaccaagtcgacgaccgcgaagacgacgcgtccc
gcggccaagaccaccacgcgcaagaccaccaagaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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