KEGG   Saccharopolyspora sp. ASAGF58: FDZ84_14475
Entry
FDZ84_14475       CDS       T06538                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
sacg  Saccharopolyspora sp. ASAGF58
Pathway
sacg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sacg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FDZ84_14475
  09124 Replication and repair
   03420 Nucleotide excision repair
    FDZ84_14475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sacg03021]
    FDZ84_14475
   03400 DNA repair and recombination proteins [BR:sacg03400]
    FDZ84_14475
Enzymes [BR:sacg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FDZ84_14475
Transcription machinery [BR:sacg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     FDZ84_14475
DNA repair and recombination proteins [BR:sacg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     FDZ84_14475
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: QIZ35680
UniProt: A0A6H1R687
Position
complement(3060134..3061795)
AA seq 553 aa
MTDGPLIVQSDKTLLLEVDHDLADETRTAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDGLVRYSRYPVPQPLLVDIVETMGRFGRLQLANDPAHGLVLNSLDRAVLEEIL
RNKKINPMLGARIDDDTVVVHPSERGRLKQLLLKVGWPAEDLAGYVDGEAHPIMLQQDGW
QLRDYQAQAVQSFWAGGSGVVVLPCGAGKTLVGAAAMAEAQATTLILVTNTVAGRQWKRE
LIERTSLTETEIGEYSGEKKEIRPVTIATYQVITRRSKGEYKHLELFDSRDWGLVVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTLTDNERLEYATAEADERYKMCSTARTKAPVVKAILDRHPGEPALVIGAYLE
QLHELGEALNAPIVEGSTKNKEREALFDAFRRGEIKRLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKAKRKQAHFYSVVSRDTLDTDYAAHRQRFLAEQGYAYRIVD
ADDLLGPAIPDVG
NT seq 1662 nt   +upstreamnt  +downstreamnt
gtgaccgacggacccctgatcgtccagtctgacaagaccctgctgctcgaggtcgaccac
gacctcgccgacgagacccgtaccgccatcgcaccgttcgcggagctggagcgcgccccg
gagcacgtgcacacctaccgcatcacgccgctcgcgctgtggaacgctcgcgccgccggg
cacgacgcggagcaggtggtggacgggctggtgcgctactcgcgctaccccgtgccgcag
ccgctgctggtggacatcgtcgagacgatgggccgcttcggccgcctgcagctggccaac
gacccggcgcatggcctcgtgctgaactcgctggaccgcgcggtgctggaagagatcctg
cggaacaagaagatcaacccgatgctgggcgcccgcatcgacgacgacaccgtggtcgtg
caccccagcgaacgcgggcggctcaagcagctactgctgaaggtcggctggcccgccgag
gacctcgccggttacgtcgacggcgaggcgcatccaatcatgctgcagcaggacggctgg
cagctgcgcgactaccaggcgcaggccgtgcagtcgttctgggccggcggctcgggcgtc
gtggtgctgccctgcggcgcgggcaagacactggtcggcgcggcggcgatggccgaggcg
caggccaccacgttgatcctggtcaccaacaccgtcgccgggcggcagtggaagcgggag
ctgatcgagcggacgtcgctgaccgaaaccgagatcggcgagtactccggcgagaagaag
gagatccggccggtcaccatcgcgacctaccaggtgatcactcgccgctccaagggcgag
tacaagcacctggagctgttcgactcccgcgactgggggctggtggtctacgacgaggtg
cacctgctgcccgcgccggtgttccggatgaccgccgacctgcagtcccggcggcgcctc
gggctcaccgcgaccctggtccgcgaggacggccgggaaggcgacgtgttctcgcttatc
gggcccaagcgctacgacgcgccgtggaaggacatcgaggcgcagggctggatcgcgccc
gccgagtgcatcgaggtccgggtgacgctgaccgacaacgagcggctggagtacgccacg
gccgaggccgacgagcgctacaagatgtgctccacggcgcgcaccaaggccccggtggtc
aaggcgatcctggaccggcacccgggcgagcccgccctggtcatcggcgcgtacctggag
cagctgcacgagctgggcgaggcgctgaacgcgcctatcgtggagggttcgacgaagaac
aaggagcgcgaggcactgttcgacgccttccggcgcggcgagatcaagcggctcgtggtg
tcgaaggtggcgaacttctcgatcgacctgccggaggcctcggtcgcggtgcaggtgtcc
gggacgttcgggtcgcggcaggaggaggcgcagcggctcggtcggctgctgcggccgaag
gccaagcgcaagcaggcgcacttctactcggtcgtctcgcgggacaccctggacaccgac
tacgcggcgcaccggcagcggttcctcgccgagcagggctacgcgtaccggatcgtcgac
gccgacgacctgctcgggcccgccatcccggacgtcgggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system