KEGG   Sulfolobus acidocaldarius N8: SacN8_03945
Entry
SacN8_03945       CDS       T02452                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
Organism
sacn  Sulfolobus acidocaldarius N8
Brite
KEGG Orthology (KO) [BR:sacn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sacn03400]
    SacN8_03945
Enzymes [BR:sacn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SacN8_03945
DNA repair and recombination proteins [BR:sacn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SacN8_03945
SSDB
Motif
Pfam: DEAD Helicase_C DEAD_assoc Lhr_WH ResIII AAA_19 PrpR_N AAA_22 A2L_zn_ribbon RUBY_RBDX
Other DBs
NCBI-ProteinID: AGE70760
UniProt: M1J4F2
Position
complement(650812..653547)
AA seq 911 aa
MISVSQTFINKLNELGYKSLTPIQKIGIPIILKGKNTIVIAPTGFGKTETAIFPVFYKIL
SSNAEKISAIYITPLRALNRDLEDRLSRIGSALGIKIAIRHGDSTERQRKRILEDPPDLL
LTTPETLLYLLVNQKMRELLGNIRWIIIDELQEMLDEKRGYELLLAIQRLKRLSKYEIQL
IGLSATIGDIELAKRFIGRNVEVAEYNTRKDVKIELVIPTVSKDLAELSYKTGLHPDTLA
RIRELEKLIKENKPVLVFTNVRESTEFLASELSKLSQLKVRTHHGSLSREIRLEAEKEFK
TGNLDALIATSSLELGIDVGTINAVIQYTSPKQVIRLVQRIGRSGHSINKVSSGFLLPSH
DIFDILECKSIIDNLKEGYLEKPIVEPKPYDVMAHEIAGLVLEGITDKKEIFNLIKSSFQ
YNDLTEEEFEETLSILESARIIRKNKDKISPAGRLWRYYYSTNMIPDSIKDYIVIDHISN
TKIGTLDYEFVATLDENTVFILGGKIWRVVSIEENRIYVENAQLKSGVLPSWFGESIPVE
REISIKVYDYIERIERGDQIDLPKEILEKISSLLEEQKRRGYPVPTKSKILVEINNDLIV
LHAGLGSRGNNTLGALLSLLLTQVKGVRTTYRSDPYHIAIASLVPVSKEEFTKAIKILNS
LSSSEFEDLLKRAIKESPQYKWKLLIEAERFGLIDKQKTDITFSQTLLKAYTDTLVGEEA
VKELMYKNYDVTLREFLTRLTWECIEVPGFSPLAKEFLNKLFVAAHSDEKGVMIEIFRRK
LLNNKVKIICMVCGWNNIYYAAEVPDRCTKCGSIFLTVTDEDDKESVEIIKKVIKGSKIS
KNEKKKFEILQNISSMFSTYKKYVAIGLSARGVGINNIGKVLNKLSDGEDRFFESLLEEE
RKFLRTRKYWQ
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgataagtgtttctcagacatttatcaataagttgaacgaacttggctataagagtctt
acccctatacaaaaaataggaataccaattatactcaagggtaagaacactattgttatt
gcaccgactggctttggaaaaacagaaactgctattttcccagttttttataaaatacta
agctcaaatgctgagaaaatttctgctatatatattactccattaagagcattaaataga
gatcttgaagatagattaagtaggataggtagcgcattaggaataaaaatagcgattcga
cacggagattcaacggagaggcaaagaaaaaggatcttggaagatccacctgatttactt
ctaacaacacctgaaacattgctctatttactagtaaaccagaaaatgagagaattatta
ggaaatataagatggatcattatagatgaattacaagaaatgcttgatgagaaacggggt
tatgaattacttttagctattcaaagattaaagaggttaagtaagtatgagattcaactg
attggactttcagcaacaataggcgatattgaattagcgaagaggtttattggaaggaac
gtagaggtcgccgaatacaataccagaaaagatgtaaaaatagagttggtcataccaaca
gtttcaaaggatcttgctgagttatcatataagacaggcttacatccagatacgctggct
agaataagagaacttgaaaaattgataaaagagaataaaccagttcttgttttcactaac
gttagagagagtacagaatttctagcctccgaattgtcaaaattgtctcaactaaaagtg
agaacacatcatggctctctatcgagagaaataagattagaagctgaaaaagaatttaag
actggcaatcttgacgcattaatagccacttcaagcttagaacttggaatagatgtagga
acaattaatgcagtaattcaatatacctctccaaagcaagttataagacttgtacaaaga
attggaagaagtggacattcaataaataaagtttctagtggttttctattaccttctcat
gatatttttgacatattagaatgtaaaagtataattgacaatttaaaggaaggataccta
gaaaaaccaatagtagaacctaaaccttatgatgttatggcacacgaaattgcaggtcta
gtactagaaggcattacagataagaaagaaatctttaacttaatcaaatcatcatttcaa
tacaacgacttaacagaagaggaatttgaagaaacattaagtatacttgaatctgcaaga
ataattagaaagaataaagataagatatcaccggcaggaagattatggagatattattat
agtacgaatatgataccagactctataaaagattacatagtcatagaccatatttctaac
actaaaataggaacgttagactatgaattcgtggctacactggatgaaaataccgtattc
atactgggaggaaaaatttggagagtagtatcaatagaggaaaatcgtatttatgtcgaa
aacgcacaactgaaaagcggagtcttgccaagctggtttggtgagtcaattccagttgaa
agagaaatttccattaaggtgtatgattatattgaaagaatagaaagaggagatcaaata
gacctaccgaaagaaatacttgaaaagatctcttcgttactagaagaacaaaaaaggcga
ggataccctgttccaactaaaagtaaaatccttgtagaaataaataatgatctaatagtt
ttacatgcaggattaggaagtagaggtaataataccctaggtgcgttattatcactttta
ttaacccaagtaaaaggagtgagaactacgtataggtctgatccctatcatatagcaata
gcctccttagttccagtatcaaaggaggaatttacaaaggcaataaaaatactaaatagt
ctaagttctagtgaatttgaagaccttctgaagagggctataaaagaaagtccacagtat
aaatggaaactcttgattgaggcggaaagattcggtcttatagacaaacaaaaaaccgat
ataacattctcccagactctccttaaagcttatactgataccttagttggagaagaagca
gtgaaagaacttatgtataaaaactatgatgtaacacttagggaattcctaactcgactt
acttgggaatgtatagaagtaccaggcttctccccactagctaaagaattccttaacaaa
ctatttgttgcagcacattcagatgaaaaaggagtaatgatagagatatttagacgtaaa
ttgttaaataataaggttaaaataatttgtatggtgtgcgggtggaataatatatattat
gctgctgaggtaccggataggtgtaccaagtgtggctcaatattcttaaccgtaactgat
gaggatgataaagaaagtgtggaaattattaaaaaggtcattaaaggttcaaagatctcg
aagaacgaaaaaaagaaatttgaaatacttcagaatatttcatcaatgttttcaacttac
aaaaaatatgttgccataggattgagtgcaagaggagtaggaataaataacattgggaaa
gtccttaataagctcagcgatggagaggacaggttttttgagagtctacttgaggaggaa
agaaagtttttaagaacacgcaagtactggcagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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