KEGG   Stenotrophomonas acidaminiphila: AOT14_35020Help
Entry
AOT14_35020       CDS       T04107                                 

Gene name
truC
Definition
(GenBank) tRNA pseudouridine synthase C
  KO
K06175  tRNA pseudouridine65 synthase [EC:5.4.99.26]
Organism
sacz  Stenotrophomonas acidaminiphila
Brite
KEGG Orthology (KO) [BR:sacz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sacz03016]
    AOT14_35020 (truC)
Enzymes [BR:sacz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.26  tRNA pseudouridine65 synthase
     AOT14_35020 (truC)
Transfer RNA biogenesis [BR:sacz03016]
 Prokaryotic Type
  tRNA modification factors
   Psudouridine synthases
    AOT14_35020 (truC)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID: ALJ29838
UniProt: A0A0S1B470
Position
complement(3835671..3836435)
Genome map
AA seq 254 aa AA seqDB search
MDHDTTTSMPARALPVLYADDWLAVVDKPAGLMVHDSKLARGEDDFLADRLREQLGRPIF
LIHRLDRATSGCLLLAFDRETASALGKALMGGDVGKDYLAVCRGWPAEDAFSVDHDLDGG
PGKPLKKPAVTHFQKLLTGELPVPSNGFPTSRYALLRCQPQTGRFRQIRRHLKHVFHHLI
GDTSHGDGRHNRTFRMHGVHRMLLHAVRLSFPHPHDGRRIEVSAPLDAEFRKAFALLGWD
ADVPTGDAPSQGHG
NT seq 765 nt NT seq  +upstreamnt  +downstreamnt
atggatcacgacaccacgacatcgatgcccgcgcgggcgttgccggtgctgtacgccgac
gactggctggccgtggtcgacaagccggccgggctgatggtccacgacagcaagctggcg
cgcggcgaggacgatttcctggccgaccgcctgcgcgagcagctgggccggccgatcttc
ctgatccatcgcctggaccgcgccaccagcggttgcctgctgctggccttcgaccgcgaa
accgccagcgcgctgggcaaggcgctgatgggtggggatgtcggcaaggactacctggcc
gtgtgccgcggctggccggcggaggatgccttcagcgtcgaccacgacctcgacggcggg
ccgggcaagccgctgaagaagccggccgtcacccacttccagaagctgctgaccggcgaa
ctgccggtgccgtccaacggcttcccgacctcgcgttacgccctgctgcggtgccagccg
cagaccgggcggttccgccagatccgccgccacctcaagcacgtgttccatcacctgatc
ggcgacaccagccatggtgacggccgccacaaccgcacgttccgcatgcacggcgtgcac
cgcatgctgctgcatgcggtgcggctgtcgttcccgcacccgcacgacgggcgtcgcatc
gaggtgagcgcgccgctggatgcggagttccgcaaggcattcgcgctgctgggctgggac
gccgacgtgccgaccggcgacgcaccgtcccaggggcacggctga

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