KEGG   Sulfurihydrogenibium azorense: SULAZ_0969
Entry
SULAZ_0969        CDS       T00876                                 
Symbol
hfq_1
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
saf  Sulfurihydrogenibium azorense
Pathway
saf02024  Quorum sensing
saf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:saf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SULAZ_0969 (hfq_1)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SULAZ_0969 (hfq_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:saf03019]
    SULAZ_0969 (hfq_1)
   03036 Chromosome and associated proteins [BR:saf03036]
    SULAZ_0969 (hfq_1)
Messenger RNA biogenesis [BR:saf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SULAZ_0969 (hfq_1)
Chromosome and associated proteins [BR:saf03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    SULAZ_0969 (hfq_1)
SSDB
Motif
Pfam: Hfq DUF5608 DUF150_C LSM
Other DBs
NCBI-ProteinID: ACN98400
UniProt: C1DV05
Position
complement(893431..893622)
AA seq 63 aa
MASVQDEILNEYRREGKEVTVYLVRGTRIVGKILDADQFTILLDVNGQQQLIYKHAISTI
VVE
NT seq 192 nt   +upstreamnt  +downstreamnt
atggcgtcagtacaagatgaaatcttaaacgagtatagaagagaaggtaaagaggtaaca
gtttacttagttagaggtacgagaatagtaggtaaaatattagatgcagaccagtttaca
attttattagacgttaacggtcagcaacaacttatatacaaacacgcaataagtacgata
gttgtagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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