KEGG   Simiduia agarivorans: M5M_19075Help
Entry
M5M_19075         CDS       T02281                                 

Gene name
aspS
Definition
(GenBank) aspartyl-tRNA ligase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
saga  Simiduia agarivorans
Pathway
saga00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:saga00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    M5M_19075 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:saga01007]
    M5M_19075 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:saga03016]
    M5M_19075 (aspS)
   03029 Mitochondrial biogenesis [BR:saga03029]
    M5M_19075 (aspS)
Enzymes [BR:saga01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     M5M_19075 (aspS)
Amino acid related enzymes [BR:saga01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   M5M_19075 (aspS)
Transfer RNA biogenesis [BR:saga03016]
 Eukaryotic Type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    M5M_19075 (aspS)
 Prokaryotic Type
   Other AARSs
    M5M_19075 (aspS)
Mitochondrial biogenesis [BR:saga03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    M5M_19075 (aspS)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID: AFV00944
UniProt: K4KS04
Position
4198890..4200662
Genome map
AA seq 590 aa AA seqDB search
MRTDYCGALNASFIDREVTLCGWVDRRRDHGGVIFLDLRDRDGIVQVVFDPDSANFALAD
KVRSEYVLKVKGRVRARSEATVNPKMATGEVEVYGLELEILNTAETPPFQLDSHVAVGED
VRLKYRYIDLRRQEMQHNLRFRSKVTTAIRNYLDGQGFLDIETPILTRATPEGARDYLVP
SRTHDGKFFALPQSPQLFKQLLMVSGFDRYYQVAKCFRDEDLRADRQPEFTQIDIETSFM
NEAQIMGIAEGMVKDLFKHLMDVDLGEFPHMTWQEAQDRYGSDKPDLRIPLELVEIKDLL
KDIEFKVFAGPANDPKCRVTALKVPGGAEISRKQIDDYTKFVGIYGAKGLAWIKVNEIEK
GVEGLQSPIIKFLGDDVTMKVMERLDAKNGDIVFFGADTIKVVSEALGALRCKLGADLNL
YTRKWAPLWVVDFPMFEETDEGVAALHHPFTAPSCSPEELEANPATALSRAYDMVLNGTE
LGGGSVRIHNQSMQQTVFKILGISAEEQREKFGFLLDALKFGAPPHGGLAFGLDRLIMLM
TDSSSIRDVIAFPKTQTAACVMTDAPGAVDNKQLRELHIRLREKETKEAK
NT seq 1773 nt NT seq  +upstreamnt  +downstreamnt
atgcgcaccgactactgtggcgcccttaatgcttcttttattgaccgcgaagtgaccttg
tgcggctgggttgatcgtcgccgtgaccacggtggcgtgatattcctggatctgcgcgac
cgcgatggcattgtgcaggtggtgttcgacccggattcggccaattttgccctggccgac
aaggtgcgcagcgaatacgtgttgaaggttaaaggccgcgtgcgtgcgcgctctgaagcc
accgttaatccgaaaatggccaccggcgaggtggaggtgtacggcctggaactggaaatc
ctcaacaccgctgaaaccccacccttccagctggattcccacgtagcggtaggcgaggac
gtgcgcctcaagtaccgttatatcgatctgcgccggcaggaaatgcagcacaacttgcgc
ttccgctcgaaagtgaccaccgcgatccgcaattacctggatggccagggcttcctggat
atcgaaaccccgatcctgacccgtgccacgcccgaaggcgcgcgcgactatctggtgcct
tcgcgtacccacgacggcaagttcttcgcgctgccccagtcgccccagctgttcaagcag
ctgctgatggtgtccggctttgatcgctactaccaggtggccaagtgcttccgcgatgaa
gacctgcgcgccgaccgccagcccgaattcacccagatcgatatcgagacctcgttcatg
aacgaagctcagatcatgggcattgccgaaggcatggtgaaggacctgttcaagcacctg
atggacgtggacctgggcgagttcccgcacatgacctggcaggaagcacaggaccgttac
ggttccgataagcccgatctgcgcatcccgctggaactggtggaaatcaaagacctgctg
aaagacattgaattcaaagtcttcgccggcccggccaatgatcccaagtgccgcgtcacc
gcactgaaagtgcccggcggtgcggaaatttcccgcaagcagatcgacgactacaccaag
ttcgtgggcatttacggtgccaaaggtctggcctggatcaaggtcaacgaaatcgagaaa
ggcgtggaaggcctgcagtcgcccatcatcaaattcctgggcgacgacgtgaccatgaag
gtaatggagcgtctggacgccaaaaatggcgacatcgtgttcttcggcgccgacaccatc
aaagtggtatcggaagcgttgggcgcactgcgttgcaagctgggtgccgacctcaatctc
tacacccgtaagtgggcacctctgtgggtggtggatttccccatgttcgaggaaaccgac
gaaggcgtggcggcattgcaccatccctttaccgcgccttcctgcagcccggaagaactg
gaagccaacccggccacagcgctgtcgcgcgcttatgacatggtgctgaacggtaccgag
ctgggcggtgggtctgtgcgtatccacaaccagtccatgcagcagaccgtgttcaaaatt
ctgggcatctccgcggaagaacagcgcgagaagttcggcttcctgttggatgcgctcaag
ttcggtgcgccgccccacggtggactggcctttggcctggaccgtctgatcatgctgatg
accgactccagctccatccgcgacgtgattgcgttcccgaaaacccagaccgcggcctgt
gtaatgacagacgccccgggtgcggtggataacaagcagctgcgcgagctgcacatccgc
ctgcgcgagaaagagaccaaagaagcgaagtaa

DBGET integrated database retrieval system