KEGG   Streptococcus agalactiae ILRI112: SAIL_2290
Entry
SAIL_2290         CDS       T02705                                 
Name
(GenBank) DNA-directed RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
sagr  Streptococcus agalactiae ILRI112
Pathway
sagr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sagr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SAIL_2290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sagr03021]
    SAIL_2290
   03400 DNA repair and recombination proteins [BR:sagr03400]
    SAIL_2290
Enzymes [BR:sagr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SAIL_2290
Transcription machinery [BR:sagr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SAIL_2290
DNA repair and recombination proteins [BR:sagr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SAIL_2290
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Peptidase_M23
Other DBs
NCBI-ProteinID: CCW41278
Position
182087..185662
AA seq 1191 aa
MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDAGLKEVFEDVLPISNFTD
TMDLEFVGYELKEPKYTLEEARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDAKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGDSELVRNTIEKDIHKNPSDSRTDEALKE
IYERLRPGEPKTADSSRSLLVARFFDPRRYDLAAVGRYKINKKLNLKTRLLNQTIAENLV
DGETGEILVEAGTVMTRDVIDSIAEHIDGDLNKFVYTPNDYAVVTEPVILQKFKVVAPTD
PDRVVTIVGNSNPEDKVRALTPADILAEMSYFLNLAEGLGKVDDIDHLGNRRIRAVGELL
ANQFRIGLARMERNVRERMSVQDNEVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGH
LNKYGFIQTPYRKVDRSTGAVTNEIVWLTADEEDEFTVAQANSKLNEDGTFAEEIVMGRH
QGNNQEFPSSIVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP
YVGTGMEYQAAHDSGAAVIAKHDGRVIFSDAEKVEVRREDGSLDVYHVQKFRRSNSGTAY
NQRTLVKVGDLVEKGDFIADGPSMENGEMALGQNPVVAYMTWEGYNFEDAVIMSERLVKE
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEDSLRDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGVVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWETVQEAGMDSDAKTVLYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDNEVELRDLDEGEDDDVMHVDDLEKARVKQEAEEKQAEQVSEVVQED
NT seq 3576 nt   +upstreamnt  +downstreamnt
ttggcaggacatgaagttcagtacggaaaacaccgtacacgtcgtagcttttcaagaatt
aaggaagttcttgatttaccaaacttaattgaaattcaaactgattcattccaagatttt
cttgatgctggcttgaaagaagtatttgaggatgtacttccaatttcaaactttacagat
actatggatcttgaatttgttggttatgaattaaaagaacctaaatatactttggaagaa
gctcgtatccatgatgctagctactcagcacctatttttgttactttccgtttagttaat
aaagaaactggtgaaattaaaactcaagaagttttctttggtgattttccaattatgact
gaaatgggtactttcatcatcaatggtggtgaacgtatcattgtttcacaattagtccgt
tctcctggtgtttactttaatgataaggtagataaaaatggaaaagttggttatgggtca
actgttatccctaaccgtggagcttggttggaacttgagacagacgcaaaagatattgct
tatacacgtatcgaccgcacacgtaaaattccattcacaacactagtccgtgcacttggt
ttctctggagacgatgaaattgttgacatctttggtgacagtgaacttgttcgcaatact
attgaaaaagacattcataaaaatccaagtgattctcgtacagatgaagcacttaaagaa
atctatgaacgtcttcgtccaggtgaaccaaaaactgcagacagctcacgtagtctttta
gttgcacgtttctttgatccacgtcgttatgacttagcggctgttggtcgttataagatt
aataaaaaactgaatcttaaaacacgcctattgaaccaaacaatcgctgaaaatttagtt
gatggtgaaacaggagagattcttgttgaagctggcactgttatgacacgagatgtcatt
gattcaattgcagagcatatcgatggagacttaaacaagtttgtctacacaccaaatgat
tatgctgtagttactgaaccagttattcttcaaaaattcaaagttgttgctccaactgat
ccagaccgtgttgttactattgttggaaactcaaatcctgaagataaagttcgtgcctta
actcctgcagatattttagcagagatgtcatacttcttaaaccttgcagagggtctcggt
aaggtagatgacattgaccatttaggtaaccgtcgtattcgtgcagttggtgaattgctt
gcgaaccaattccgtattggacttgctcgtatggaacgcaatgtccgcgaacgtatgtct
gtacaagacaatgaagtcttgacacctcaacaaatcattaacattcgtccagtgactgcc
gctgttaaagaattctttggttcatcacagctgtcacaattcatggaccaacacaaccct
ctatcagaattgtcgcacaaacgccgtctctctgccttaggacctggtggtttgacacgt
gaccgtgctggatatgaagttcgtgatgtgcactatacccactatgggcgcatgtgtccg
attgaaacacctgaaggtccaaacattggtttgattaataacttatcttcatttggacac
ctcaataaatatggatttattcaaacaccatatcgtaaagtagatcgttctactggtgcg
gtaacgaacgaaattgtttggttgactgctgatgaagaagatgaatttacagttgcacaa
gccaactctaaacttaacgaagacggtacatttgcagaagaaatcgttatgggtcgtcat
caaggtaataaccaagagtttccttcaagcattgttgactttgttgacgtgtcacctaag
caagtagttgctgtcgcaacagcatgtattcctttcttggaaaatgatgactctaaccgt
gccttgatgggtgccaacatgcaacgtcaggctgtgccattgattgatccaaaagcacca
tatgttggtactggtatggagtatcaagcagcccacgattcaggtgcagctgtgattgct
aaacatgacggtcgtgttattttttcagatgctgaaaaagttgaagtgcgtcgcgaagat
ggttctcttgatgtttatcatgttcaaaaattccgccgttcaaactcaggtactgcttat
aaccaacgtaccttagttaaagttggtgatctcgttgaaaaaggtgattttatcgccgac
ggaccatctatggaaaatggtgaaatggctcttggacaaaacccagttgttgcttatatg
acttgggaaggttataacttcgaggatgccgttatcatgagtgagcgccttgtgaaagaa
gacgtctatacatctgttcacttggaagaattcgaatctgaaacgcgtgatacaaagctt
gggcctgaagaaattactcgtgaaattccaaatgttggtgaagattcactacgtgatctc
gatgaaatgggaatcatccgcattggtgctgaggtaaaagaaggtgacattcttgttggt
aaggtaacgcctaagggtgaaaaggacttatctgctgaagaacgtctcttgcatgccatt
tttggtgataaatcacgtgaagttcgtgatacttcactacgtgtacctcacggtggcgat
ggagtagttcgtgacgttaaaatctttactcgtgcaaatggtgatgaattgcaatcaggt
gttaatatgcttgtccgcgtttatatcgctcaaaaacgtaaaatcaaagtcggtgataag
atggccggtcgtcacggaaacaaaggtgtcgtctcacgtattgttcctgttgaagatatg
ccttatttaccagatggaacgccagttgatatcatgttgaacccacttggggtgccatca
cgtatgaatatcggacaagttatggagcttcatttaggtatggctgctcgtaatttaggt
attcatattgcaacgccagtctttgatggggcttcttcagaagacctttgggaaactgtt
caagaagcaggtatggattcagatgctaagactgttctttatgatggtcgtactggtgaa
ccattcgataaccgtgtgtcagttggtgtcatgtacatgatcaaacttcaccacatggtt
gatgataaacttcatgcccgttcagtaggaccatactcacttgttactcaacaaccactt
ggaggtaaagctcaatttggtggacaacgttttggtgagatggaggtttgggcgcttgaa
gcttatggtgcttcaaatgttcttcaagaaattttaacatacaaatctgatgatgttaca
ggacgtcttaaagcttatgaagctatcacaaaaggtaagccaattccaaaaccaggtgtt
ccagaatcattccgtgttcttgtaaaagaattgcaatcacttggtcttgatatgcgtgtc
cttgatgaagatgacaacgaagttgaactccgtgatcttgatgaaggtgaagatgatgat
gtgatgcacgttgatgaccttgaaaaagcacgtgtgaaacaagaagctgaagaaaaacaa
gctgaacaagtatctgaagtcgttcaagaagattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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