KEGG   Sagittula sp. P11: CDO87_13605
Entry
CDO87_13605       CDS       T05219                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
sagu  Sagittula sp. P11
Pathway
sagu03030  DNA replication
sagu03430  Mismatch repair
sagu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sagu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CDO87_13605
   03430 Mismatch repair
    CDO87_13605
   03440 Homologous recombination
    CDO87_13605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sagu03032]
    CDO87_13605
   03400 DNA repair and recombination proteins [BR:sagu03400]
    CDO87_13605
Enzymes [BR:sagu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CDO87_13605
DNA replication proteins [BR:sagu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CDO87_13605
DNA repair and recombination proteins [BR:sagu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CDO87_13605
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2
Other DBs
NCBI-ProteinID: AUC54146
Position
2816641..2820141
AA seq 1166 aa
MADPRFIHLRTHTEYSLLEGALRLKKLPGMCADMGMPAVAVTDTNNLFAALEFSVGAAGA
GVQPIIGCQIDLRYFEHAPGERIRPPAPVVLLAQTERGYEHLMKLNSCLYLRRDNELAHV
TLDELEAHSEDVICLSGGPDGPVGRLLRTNSRAAAQTLMTRLHSIFEDRLYVELQRHPGE
DGTPPEAEQLTERGFVEMAYEMGLPLVATNDVYFPKSTMYEAHDAMICIAEGAYVDQQEP
RRRLTPQHYLKTPQEMAVLFADLPEALENTVEIAKRCAFMAYRRDPILPRFADDEVTELR
RMANEGLQARLAVIPHAVPVEEYQKRLDFELGIIEGMGFPGYFLIVADFIQWAKDQDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIQYV
QQKYGHDRVAQIITFGALLSKAAVRDMGRVLQMPYGQVDRLSKMIPVEGVKPVSIEQALR
DEPRLAEEARNEEVVDRLLKYGMQVEGLLRSAGTHAAGVVIADRPTDELVPLYRDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAMDLIFKSGRPLHVAADGTQLYEPPEGAE
NQINLIPLDDKVTYKLYASAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGLREITSVHPSIDHILAETQGIIVYQEQVMQIAQEMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFEQGAAKNGVEKKKATEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVRKGLGLPWVPPCVNRSLATFDVVEGQ
LVYALGALKNVGLEAMKLVVEGRDGRPFSTVFDFARRVDLKKIGKRPLEMMARAGCFDVL
DPNRRRLFDSLDALVAYSAAIHEQKSSAQVSLFGEAGDDLPEPRLSPVSDWLPAERLAEE
FKAVGFYLSGHPLDDYMPALKRQDVVTLDEVMAKAERGPLVAKLAGVVAGRQERKSARGN
RFAFAQLSDPTGAYEVTLFSETLEKSREHLETGSKVVVTVEATMESDQLKLLGRAVMPVD
AAAAQGGPSGMRIFVDTEMALSQIASVLGRAAEQLPKAPRAPIVLRLAAPGLPGEVEMDL
SERFPVTPEIKGAVKSLDGVLAVEDF
NT seq 3501 nt   +upstreamnt  +downstreamnt
atggcagatccgcgattcatccacctccgcacccacaccgaatattctcttctcgaaggc
gcgctccggctgaagaagctgccgggcatgtgtgccgacatggggatgcccgccgtggcg
gtcaccgacaccaacaacctgttcgccgcgctggaattttccgtgggcgccgccggggcg
ggcgtgcagccgatcatcggctgccagatcgacctgcgctatttcgagcacgccccgggc
gagcggatcaggccgccggcgccggtggtgctgctggcccagacggagcgcggctacgag
catctgatgaagctcaattcctgcctgtacctgcgccgcgacaacgagctggcgcatgtg
acgctggacgaactggaggcgcattcggaggacgtgatctgcctgtcgggcgggccggac
gggccggtggggcggcttctgcgcaccaattcgcgggcggcggcgcagacgctgatgacc
cggctgcattcgatcttcgaagaccggctgtacgtcgagctgcagcgccaccccggcgag
gacggcacgccgcccgaggcggagcaactgacggagcgcggctttgtcgagatggcctac
gagatgggcctgccgctggtcgcgacgaacgacgtctatttcccgaagtccaccatgtac
gaggcgcatgacgcgatgatctgcatcgcggagggcgcctatgtcgaccagcaggaaccg
cgccgccgcctgacgccgcagcactacctgaagaccccgcaggagatggcggtgctgttc
gccgacctgccggaggcgctggaaaacaccgtcgagatcgcgaagcgctgtgccttcatg
gcctatcgccgcgacccgatcctgccgcgtttcgccgacgacgaggtgacggaactgcgc
cgcatggcgaacgaggggctgcaggcgcgtctggccgtgatcccgcatgccgtgccggtg
gaggaataccagaagcggctcgacttcgagctggggatcatcgaggggatgggcttcccc
ggctacttcctgatcgttgcggatttcatccagtgggccaaggaccaggacatcccggtc
gggccggggcggggctcgggcgcggggtcgctggtggcctacgcgctgacgatcaccgac
ctcgacccgctccgctattcgctgctgttcgaacgcttcctgaacccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgcatggatcgccgcgaggaggtgatccagtacgtg
cagcagaagtacggccatgaccgggtcgcgcagatcatcaccttcggcgcgctcctgtcg
aaggcggcggtgcgcgacatgggccgggtcctgcagatgccctacgggcaggtggaccgc
ctgtcgaagatgatcccggtggagggggtcaaacccgtgtccatcgagcaggcgctgcgg
gacgagccgcggctggccgaggaggcgcggaacgaggaggtcgtcgaccggctgctgaaa
tacgggatgcaggtggaggggctgctgcgcagcgccggcacgcacgcggcgggcgtggtc
atcgccgaccgccccacggacgagctggtgccgctctaccgcgacccgcgttccgacatg
ccggcgacgcagttcaacatgaagtgggtggagcaggccggtctggtgaagttcgacttc
ctcggcctgaagacgctgacggtgatccagaacgccatggacctgatcttcaagtccggg
cgcccgctgcatgtcgccgccgacggcacgcagctgtacgagccgccggagggggcggag
aaccagatcaacctgatcccgctggacgacaaggtcacctacaagctctatgcctcggcc
aagacggtggcggtgttccaggtggaaagctcgggcatgatggatgcgctcaagcgcatg
aagcccacctgcatcgaggacatcgtggcgcttgtggcgctgtaccgccccggcccgatg
gagaacatcccggtctattgcgaggtcaagaacggcctgcgcgagatcacgtccgtccac
ccgtccatcgaccacatcctggccgagacgcagggcatcatcgtttaccaggaacaggtg
atgcagatcgcgcaggagatggcgggctactcgctcggcggcgccgacctgctgcgccgc
gcgatgggcaagaagatcaaggaggcgatggacgccgaacggcccaagttcgaacagggc
gcggcgaagaacggggtggagaagaagaaggccaccgaggtcttcgaccttctggagaag
ttcgccaactacggcttcaacaagtcgcacgcggcggcctacgcggtggtcagctaccag
accgcgtggctcaaggcgaaccacccggtggagttcatggcgggcgtcatgaactgcgat
atccacctgactgacaagctggccgtctatttcgaggaggtccgcaaggggctgggcctg
ccgtgggtgccgccctgcgtgaaccgctcgctcgcgacgttcgacgtggtggaggggcag
cttgtctatgccctgggcgcactgaagaacgtgggcctcgaggcgatgaagctggtggtg
gaggggcgcgacgggcggccgttctcgaccgtcttcgactttgcccgccgcgtggacctg
aagaagatcggcaagcgtcctctggagatgatggcgcgggcgggctgtttcgacgtgctc
gacccgaaccgccggcggctgttcgattcgctcgacgcgctggtggcctattcggcggcg
atccacgagcagaagagctccgcccaggtgtcgctgttcggcgaggcgggcgacgatctg
ccggagccgcgcctgtcgccggtgtccgactggctgcccgccgaacggctggcggaggag
ttcaaggcggtgggcttctacctgtccggtcacccgctcgacgattacatgcccgcgctg
aagcggcaggacgtggtgacgctggacgaggtcatggccaaggccgagcgcggcccgctg
gtggccaagctggcgggcgtcgtggccggacggcaggaacgcaagtcggcgcgcggcaac
cgttttgcctttgcgcagctgtcggacccgaccggcgcctacgaggtcacgctgttctcc
gagacgctggagaagtcgcgcgaacacctcgagaccgggtcgaaggtcgtcgtcaccgtc
gaggcgacgatggagagcgaccagttgaaactgctgggccgggcggtgatgccggtggat
gcggcggcggcgcagggcggcccttcggggatgcggatcttcgtcgacacggagatggcg
ctgagccagatcgccagcgtgctgggccgcgccgccgagcagttgccgaaggcgccgcgc
gcgccgatcgtgctgcggctggcggcgccgggcctgccgggcgaggtggagatggacctt
tccgaacgcttccccgtcacgccggagatcaagggcgcggtgaaatcgctcgacggggtg
ctggcggtcgaagacttctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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