KEGG T05219: CDO87

Sagittula sp. P11: CDO87_20325

Entry

CDO87_20325       CDS       T05219

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

sagu Sagittula sp. P11

Brite

KEGG Orthology (KO) [BR:sagu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sagu03032]
    CDO87_20325
   03400 DNA repair and recombination proteins [BR:sagu03400]
    CDO87_20325
Enzymes [BR:sagu01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CDO87_20325
DNA replication proteins [BR:sagu03032]
Prokaryotic type
  DNA Topoisomerases
   CDO87_20325
DNA repair and recombination proteins [BR:sagu03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CDO87_20325

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C DUF5791

Other DBs

NCBI-ProteinID:

AUC55365

Position

complement(4218287..4221019)

AA seq 910 aa
MTDTPEPPENEEEKRPSYIGPSISIEEEMKSSYLDYAMSVIVSRAIPDLRDGLKPVHRRI
LYAMHEGGYTPDKSYRKSAKSVGEVMGNYHPHGDSAIYDALVRMAQDFSMSLPLIDGQGN
FGSMDGDPPAAMRYTESRLAKSALQLLVDIDKETVDFQDNYDGKEREPTVLPARYPNVLV
NGAEGIAVGMATRIPPHNLGEVIDATLALMDNPDLSSEDLMEWVKGPDFPTGGIMLGRSG
ARKAYLEGRGSVIIRAATRVEEIRKDRYAIVISAIPYQVNKATMIERIAEAARDKKIEGI
AHVQDESDRDGVRVVVELKRDATAEVVLNQLFRFTPMQTSFGCNMLALNGGKPEQLTLRG
FLSAFLDFREDVIARRTAYLLRKARERSHVLCGLAVAVSNVDEVVATIRSSADAAEARQR
LMERRWPAHEILPYIALIDDPTHKANEDGTYNLSETQARAILDLRLQRLTQIGVKEVTDE
LEDLASKIKDYLEILSSRERITGIIREEMTAIRDEFAVPRRTEIVDWAGDLDDEDLIERE
DMVVTVTAGGYIKRTALADFRAQKRGGKGLSGGGLKEDDVVTTLFVANTHTQLLFFTTDG
MVYKLKTWRLPLGGRTSKGKAIVNILPIPAGVSIAAIMPVDRDEDEWDDLQIVFATSKGS
VRRNRLSDFTNVMRNGKIAMKFEGEDENTRLINARICSEDDDVMLVTNSGRAIRFPVPEV
RVFNSRNSTGVRGIRLMNGDEVVSMSVIRHFEAESDERASYLKMRRLMAGVTDDEAGDEE
GDADTPLPQERYAEMSAVENLILTVTAKGLGKLSSSHDYPVRGRGGQGVTAWEKSMRGGD
IVASFPVEQGDQIMLATSTGQSIRVPVDGISFRSRSAGGVRVFNTGAGETVVSVAWIADQ
ADEEPEDSAD

NT seq 2733 nt +upstreamnt +downstreamnt
gtgaccgatacgcccgaaccccctgaaaacgaagaagaaaagcgtccgagctacatcggc
ccctcgatctccatcgaagaagagatgaagtcgagctatctcgattacgcgatgagcgtg
atcgtgagccgggcgattccggacctgcgcgacggcctaaaacctgtgcaccggcgcatc
ctctacgcgatgcacgaaggcggttacacgcccgacaagtcgtaccggaagtcggcgaaa
tccgtgggcgaggtgatgggcaactatcacccgcacggcgattccgcgatctacgacgcg
ctggtccgcatggcgcaggacttctccatgtcgctgccgctgatcgacggccagggcaac
ttcggctccatggacggcgacccgccggcggccatgcgttacaccgaaagccggctggcg
aaatccgcgctgcaattgctggtggatatcgacaaggaaaccgtcgatttccaggacaac
tacgacggcaaggaacgtgagcccacggttctgccggcccgctatcccaacgtgctggtc
aacggcgccgaaggcatcgccgtcggcatggcgacccgcatcccgccgcacaacctcggc
gaggtgatcgacgcgacgctggcgcttatggacaaccccgacctcagctccgaggacctg
atggaatgggtcaagggcccggacttccccaccgggggcatcatgctgggccggtccggc
gcgcggaaggcctacctcgaagggcgcgggtcggtcatcatccgtgccgccacccgggtc
gaggagatccgcaaggaccgctatgccatcgtcatcagcgccatcccctaccaggtgaac
aaggccacgatgatcgagcgcatcgccgaggccgcgcgcgacaagaagatcgagggcatc
gcccacgtccaggatgaatccgaccgcgatggcgtgcgggtcgtggtggaactgaagcgc
gacgccaccgccgaggtggtgctgaaccagcttttccgctttaccccgatgcagacctcc
tttggctgcaacatgctggcgctgaacggcggcaagcccgagcagctcacgctgcgcggt
ttcctgtcggcgttcctcgacttccgcgaggacgtgatcgcgcgccgcaccgcctacctg
ctgcgcaaggcccgcgaacggtctcacgtgctgtgcggtctggccgtggcggtgtcgaac
gtcgacgaggtcgtggcgacgatccggtcgtccgccgatgcggcggaggcccggcagcgg
ctgatggagcggcgctggcccgcgcacgagatcctgccctacatcgcgctgatcgacgat
ccgacccacaaggccaacgaggacggcacctacaacctgtccgaaacgcaggcccgtgcg
atcctcgacctgcgcctgcagcgcctgacccagatcggtgtcaaggaagtcaccgacgag
ctggaagacctggcgtccaagatcaaggactacctggagatcctgtcgagccgcgagcgg
atcaccggcatcatccgcgaggaaatgaccgccatccgcgacgagttcgccgtgccgcgc
cgcacggagatcgtcgactgggccggcgacctcgacgacgaggacctgatcgagcgcgag
gacatggtcgtgaccgtcaccgcgggcggctacatcaagcgcaccgcgctggctgacttc
cgcgcgcagaagcgcggcggcaaggggctgtccggtggcgggctgaaggaggacgacgtc
gtcacgacgctgtttgtcgccaacacccacacgcagcttctgttcttcacgacggacggc
atggtctacaagctgaagacatggcgcctgccgctgggcggacgcacgtcgaagggcaag
gcgatcgtcaacatcctgccgatcccggccggtgtctccatcgccgcgatcatgcccgtg
gaccgggacgaggacgagtgggacgaccttcagatcgtctttgcgacctccaagggttcg
gtccgccgcaaccggctgtcggatttcaccaacgtcatgcgcaacggcaagatcgcgatg
aagttcgagggcgaggacgagaacacccgcctgatcaacgcgcgcatctgttcggaggat
gacgacgtgatgctggtcaccaactccggccgggcgatccgtttcccggtgccggaggtg
cgggtcttcaactcgcgcaattcgaccggcgtgcgcggcatccgcctgatgaacggcgac
gaggtcgtgtcgatgtcggtgatccgccacttcgaggcggagtcggacgaacgtgccagc
tatctcaagatgcgccgcctgatggccggcgtgacagacgacgaggccggcgacgaggaa
ggcgatgcggacacgccgctgccgcaggaacgctatgcggagatgtcggcggtcgagaac
ctgatcctgaccgtcaccgccaagggcctgggcaagctgtcgtcctcgcacgattacccg
gtgcgcggacgtggcggccagggtgtcaccgcgtgggagaaatccatgcgcggcggcgat
atcgtggcctccttcccggtggaacagggcgaccagatcatgctggcgacctctaccggc
cagtcgatccgggtgccggtggacggcatctcgttccggtcgcggagcgcgggcggcgtg
cgggtgttcaacaccggcgcgggcgaaaccgtggtgtccgtggcatggatcgcggaccag
gccgacgaagagcccgaggacagcgccgactga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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