KEGG   Sagittula sp. P11: CDO87_22045
Entry
CDO87_22045       CDS       T05219                                 
Name
(GenBank) Crp/Fnr family transcriptional regulator
  KO
K11531  lsr operon transcriptional repressor
Organism
sagu  Sagittula sp. P11
Pathway
sagu02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sagu00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CDO87_22045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sagu03000]
    CDO87_22045
Transcription factors [BR:sagu03000]
 Prokaryotic type
  Other transcription factors
   Others
    CDO87_22045
SSDB
Motif
Pfam: Sugar-bind Sigma70_r4_2 MarR_2 Fe_dep_repress Sigma70_r4 HTH_24 HTH_23 HTH_38 HTH_3 HTH_31 HTH_Tnp_ISL3 Phage_antitermQ HTH_Crp_2 Rv2175c_wHTH Bac_DnaA_C HTH_IclR Mpt_N HTH_17 TrmB HTH_20 HTH_29 MarR Glyco_hydro_3_C Sigma70_ECF
Other DBs
NCBI-ProteinID: AUC55989
Position
unnamed1:650..1621
AA seq 323 aa
MDQLQDIAQVRRIYTALTLHYVDGLTQAQVAERMGQSHSTVNRMIKAGHEMGMVEISIRS
PFQDHLALERELAEISGLREVVIEPTASDNPEAVLARVGSTAAELLVSKLKPGMTVCLTG
GKGVSACVAGLRQVVPLRGMTAVPATGLVQGKHYTDVNHAAATLARAFGGEAVQMLSPMF
AETEEQHAMITGMKTVSRVMEAARAADVALVGIGGLREKATSYFDLHRDVPAEEEALYAS
GAVAELMAHVLDARGEVTDYVRNRLVVAISPADLAKVPLSIGVAAGQEKAEAICAVVRGG
YINTLVTDEVTARSVLARLKEAG
NT seq 972 nt   +upstreamnt  +downstreamnt
atggaccagcttcaggacatcgcgcaggtgcgccggatctacaccgcactgacgctgcat
tacgtggacgggctgacacaggcccaggtggcggaacggatggggcagagccattccacc
gtgaaccggatgatcaaggccgggcacgagatgggcatggtcgaaatctcgatccgctcg
cccttccaggaccatctggcactcgaacgcgaactggccgagatctcgggcctgcgcgag
gtggtgatcgaacccaccgcctccgacaaccccgaggcggtgctggcccgggtcggcagc
accgccgccgagctcttggtgtcgaagctgaagcccggcatgaccgtctgcctgacgggc
ggcaagggcgtgagcgcctgcgtcgccgggctgcggcaggtggtgccgctgcgcggcatg
acggcggtgcccgcgaccggactcgtgcagggcaaacactatacggatgtgaaccacgcg
gccgccacgctggcccgggccttcggcggcgaggcggtgcaaatgctctcgcccatgttc
gccgagaccgaggagcagcacgccatgatcaccggcatgaagacggtcagccgcgtgatg
gaggctgcccgcgccgccgacgtggctctggtcgggatcggcgggctgcgcgaaaaggcg
acatcctatttcgacctgcaccgtgacgtacccgccgaggaagaggcgctttatgcctcg
ggtgcggtggcggaactgatggcgcatgtgctcgacgcgcgcggcgaagtcaccgactac
gtgcgcaaccggctggtggtggcgatctctccggcggatctggccaaggtgccgctcagc
atcggcgtcgccgccgggcaggaaaaggccgaggccatctgcgccgtggttcgcggcggc
tacatcaacacgcttgtgaccgacgaggtcaccgcccgctccgtgttggcgcgcctgaag
gaggccggatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (35)   

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