KEGG   Sphingopyxis alaskensis: Sala_0463
Entry
Sala_0463         CDS       T00361                                 
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
sal  Sphingopyxis alaskensis
Pathway
sal00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sal00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Sala_0463
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sal01007]
    Sala_0463
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sal03016]
    Sala_0463
Enzymes [BR:sal01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     Sala_0463
Amino acid related enzymes [BR:sal01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   Sala_0463
Transfer RNA biogenesis [BR:sal03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Sala_0463
SSDB
Motif
Pfam: tRNA-synt_1f tRNA-synt_1g tRNA-synt_1b Anticodon_2
Other DBs
NCBI-ProteinID: ABF52184
UniProt: Q1GVY8
Position
474351..475952
AA seq 533 aa
MTDLHLHPSLREAAQTSRAWPFEEARKLVKRYPEGKPGGAPVLFETGYGPSGLPHIGTFN
EVLRTTMVRRAYETLTGGAPTRLVAFSDDMDGLRKVPDNVPNGAMLREHLGRPLTAIPDP
FGKYESFAHHNNAMLREFLDRFGFDYEFVSSTERYTSGAFDEALKNVLRHNQDILDIMLP
TLRAERAATYSPVLPVSPKSGIVLQVPVTVVDAEAGLVSFEDEGETITHSILRGGAKLQW
KVDWAMRWVALGVDYEMYGKDLTDSGVQSGKIARALGGRKPEGLIYEMFLDEKGEKISKS
KGNGLSMEEWLTYGSEESLAFYAYREPKAAKQLHIGVVPKAVDEYLQMRGTYPAQEPDKR
LGNPVHHVHVARGQDVPETVLPVTYGLLLNLVGVMGADASKEQIWRYLGQYVAGADAATY
PELDRLIDNAMAYNRDFVAPTLQRRKPAGGEVAALRELDARLAALPADASADDIQNIVYE
IGKDEAHGFDNLRDWFRALYETLLGSSAGPRMGSFIALFGVENTRRLIAEALA
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgaccgacctgcatcttcatccgtcgctgcgcgaggctgcgcaaacgtccagggcctgg
ccgttcgaggaagcgcgcaagctggtcaaacgctatcccgaaggcaagccgggcggcgcg
cctgtgctgttcgagaccggctatggcccgtcgggcttgccgcatatcggcaccttcaac
gaagtgctgcgcacgacgatggtgcggcgcgcctatgagacgctgaccggcggcgcgccg
acgcggctcgtcgcgttcagcgacgatatggacggcctgaggaaggtgcccgacaatgtg
ccgaacggcgccatgctgcgcgagcatctggggcggccgctgaccgcgatccccgacccg
ttcggcaaatatgagagctttgcgcatcacaataatgcgatgctgcgcgagttcctcgac
cgcttcggtttcgattacgagttcgtcagctcgaccgaacgctacacatcgggcgcgttc
gacgaggcgctgaagaatgtcctgcgccacaatcaggacatactcgacatcatgctgccg
acgctgcgcgccgagcgcgccgcgacctattcgccggtgctgccggtgagcccgaagtcg
ggcatcgtgttgcaggtgccggtcaccgtcgtcgatgccgaggcgggcctcgtgtcgttc
gaggatgaaggggagacgatcacccattcgatcctgcgcggcggcgccaagctccagtgg
aaggtcgactgggcgatgcgctgggtcgcgctgggcgtcgattatgaaatgtacggcaag
gatctgaccgacagcggcgtccagtcgggcaagatcgccagggcgctcggcgggcgcaag
cccgaggggctgatctatgagatgttcctcgacgaaaagggcgagaagatttcgaagtcg
aagggcaatggcctgtcgatggaggaatggctgacctatggcagcgaggaaagcctggcc
ttttacgcctatcgcgagcccaaggcggcgaagcagctgcatatcggcgtggtgccgaaa
gcggtcgacgaatatctgcagatgcgcggcacctatccggcgcaggagcccgacaagagg
ctgggcaaccccgtgcatcatgtccatgtcgcgcgcggtcaggatgtgccggagacggtg
ttgccggtgacatatggcctgctgctcaacctcgtcggggtgatgggcgccgatgcgtcg
aaggagcagatctggcgctacctcggtcaatatgtcgcgggagccgatgcggcgacctat
cccgagctcgaccggttgatcgacaatgcgatggcgtataaccgcgatttcgtcgcgccg
accttgcagcgccgcaagcccgcgggcggcgaggtcgcggcgctgcgcgagctcgatgcg
cggctcgccgcgctgcccgccgacgcctcggccgacgacatccagaatatcgtctatgaa
atcggcaaggacgaggcgcacggcttcgacaatctgcgcgactggttcagggcgctgtac
gagacgctgctgggatcgagtgcgggtccgcgtatgggcagctttatcgcgctgttcggg
gtggagaatacgcggcggctgatcgcggaagcgctggcgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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