KEGG   Sphingopyxis alaskensis: Sala_1192
Entry
Sala_1192         CDS       T00361                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
sal  Sphingopyxis alaskensis
Brite
KEGG Orthology (KO) [BR:sal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sal03009]
    Sala_1192
Enzymes [BR:sal01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Sala_1192
Ribosome biogenesis [BR:sal03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Sala_1192
SSDB
Motif
Pfam: tRNA_U5-meth_tr Met_10 PSD5
Other DBs
NCBI-ProteinID: ABF52908
UniProt: Q1GTW4
Position
1232850..1234049
AA seq 399 aa
MGETVLIDRIAARGDGVTGDGRHVAGAVPGDRLRDDGIIIPGPNRAEPMCRHFGKCGGCQ
LQHVAEPALAGFVRDRVIGGLEGQDVPFGEILPALLSAPHSRRRAALTALRTGRQVAIGF
NAAQSNQIVDMRMCPLLAPELFALVAPVRELLAMIAQPRRPVKVKLQLLDQGVELILEGV
KAEGLDAAMALQDFAGAHSLARFAVDQGDGLEILWQPDRPTVRFGDIAVEVPPFAFLQPT
AAGQAALVDAVARAIGDASTVADLFAGVGTFALSVQAGRKVYAAEGARDAIAALAGAANR
ARALVTTEHRDLFRRPLVPTELNRFGAIILDPPRAGAEEQVKQLAASAAAVIAYVSCNPA
SFARDAKILVEGGYTLDWVQPVGQFRWSTHVELAARFAR
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgggcgaaacggtgctgatcgatcgcatcgccgcacgcggcgatggcgtgaccggcgac
ggtcgccatgtggcgggcgccgtgccgggcgaccgcttgcgcgatgacgggatcatcatt
ccggggccgaaccgtgccgagccgatgtgccgccatttcggtaaatgcggcggctgtcag
ttgcagcatgtcgccgaaccggcgctggccggtttcgtgcgcgaccgcgttatcggcggg
ctggaagggcaggatgtgccctttggcgagattctgccggcactgctctccgctccgcac
agccgccgccgcgcggcgctgaccgcgctcaggacgggcagacaggttgccatcgggttc
aacgcggcgcagagcaaccagatcgtcgacatgcggatgtgtccgctgcttgccccggag
ttgttcgcgcttgtggcgccggtgcgcgaactgctggcgatgatcgcgcagccgcggcgc
ccggtgaaggtcaagctgcaactgctcgaccagggcgtcgaactgatattggagggcgtg
aaggccgaggggctcgatgcggcgatggcgctgcaggatttcgccggtgcgcacagtctg
gcgcgttttgccgtcgatcagggcgacgggctcgaaatcctgtggcagcccgatcggccg
acggttcgctttggcgatatagcggtcgaagtgccgcccttcgcctttctgcagccgacg
gcggcggggcaggcggcgctcgtcgatgccgtcgccagggccatcggcgatgcgtccacg
gtggccgacctgttcgcgggtgtcggcaccttcgcgctgtcggtgcaggcgggacgcaaa
gtctatgccgccgagggcgcgcgcgatgcgatcgcggcgctggcgggggccgccaaccgc
gcccgcgcgctggtcacaaccgagcatcgcgacctcttccgccgcccgctggtgccgacc
gagctcaaccgtttcggcgcgatcatcctcgacccgccacgcgcgggcgccgaggagcag
gtgaagcaactcgccgcgtcagcggcggcggtgatcgcctatgtcagctgcaatccggcc
agctttgcccgtgatgcgaagatactcgtcgagggcggctatacgctcgactgggtgcag
cccgtcggccagttccgatggtcgacccatgtggaactggccgcgcgcttcgcccgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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