KEGG   Sphingopyxis alaskensis: Sala_2988
Entry
Sala_2988         CDS       T00361                                 
Name
(GenBank) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
sal  Sphingopyxis alaskensis
Pathway
sal03030  DNA replication
sal03430  Mismatch repair
sal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sala_2988
   03430 Mismatch repair
    Sala_2988
   03440 Homologous recombination
    Sala_2988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sal03032]
    Sala_2988
   03400 DNA repair and recombination proteins [BR:sal03400]
    Sala_2988
   03029 Mitochondrial biogenesis [BR:sal03029]
    Sala_2988
DNA replication proteins [BR:sal03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Sala_2988
DNA repair and recombination proteins [BR:sal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     Sala_2988
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Sala_2988
Mitochondrial biogenesis [BR:sal03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    Sala_2988
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-ProteinID: ABF54693
UniProt: Q1GNS9
Position
3130758..3131279
AA seq 173 aa
MAGSVNKVILIGNLGADPEIKSFQNGGKIANIRIATSEQWKDRMTGERKERTEWHNVVIN
GEGLVGVVERYLKKGSKVYVEGSLRTRKWQDRDGNDRYTTEVVIAGMGGNLTMLDGAPGG
GARGGGGDSWNQGGGSSGGWDQGGSGGGGSGGGGAPGGGRPPFDDDLDDDVPF
NT seq 522 nt   +upstreamnt  +downstreamnt
atggctggcagcgtcaacaaggtaattctcatcggcaacctcggcgccgatcccgaaatc
aagtcgttccagaatggcggcaagatcgccaacatccgcatcgcgacatccgaacagtgg
aaggaccggatgaccggcgagcgcaaggagcgcaccgaatggcataatgtcgtgatcaac
ggcgaagggctggtcggcgtcgtcgaacgctatctcaagaagggcagcaaggtttatgtc
gagggcagcctgcgcacccgcaagtggcaggaccgcgacggcaacgaccgttatacgacc
gaagtggtgattgccggcatgggcggcaatctgacgatgctcgacggcgcgcccggtggc
ggcgcgcgcggtggcggcggcgatagctggaatcagggcggcggttcgagcggcggctgg
gatcaggggggcagcggcggcggcggttcgggcggcggcggcgcgccgggtggcggacgc
ccgccgttcgacgatgatctggacgatgacgtcccattctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system