KEGG   Sphingopyxis alaskensis: Sala_3105
Entry
Sala_3105         CDS       T00361                                 
Name
(GenBank) Exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
sal  Sphingopyxis alaskensis
Pathway
sal03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Sala_3105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sal03400]
    Sala_3105
Enzymes [BR:sal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Sala_3105
DNA repair and recombination proteins [BR:sal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Sala_3105
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB DHQ_synthase
Other DBs
NCBI-ProteinID: ABF54809
UniProt: Q1GNG3
Position
3253329..3254756
AA seq 475 aa
MAVPFPDEAPGDGTDARLLAEAAPGDNVPPLSVSQLSAAIKRTVEDGFARVRVRGELSGA
KRAASGHFYAALKDDNALIDMVMWKGQAARLAFRPEDGIEVIATGKLTTYPGRSKYQLVV
ESLEVAGEGALMLLFEKLKARLGGEGLFDRDRKQPLPYLPRTIGVVTSPTGAVIRDILHR
LADRCPSHVIVWPVLVQGEGAAAQVAAAIRGFDALAPGGKVARPDLVIVARGGGSIEDLW
AFNEEVVVRAIADCRIPTISAVGHETDVTLADYAADMRAPTPTAAAEMAVPVRAELQAQL
ATWGGRMIGAANRQQALRGERLTALARHLPRRDALYAPQRQRLDDVGERLGRGQRQRLAM
LGERLGARGAALRPALLARAWDRDRAKLDGLGRLLASLDPRALLSRGYAMVRDAGGAIVT
SAAKARDAGHLRLQFADGELPVTVGEGGDPAPSSGPRPARKASPSAPKAGQGELF
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggcagttccttttcccgatgaggcgcccggcgacggcaccgacgcgcggctgttagcc
gaggcggcgcccggcgacaatgtgccgccgctgtccgtcagccaattgtcggcggcaatc
aagcgcaccgtcgaggacggtttcgcgcgcgtgcgcgtgcgcggcgagctgtcgggggcg
aagcgcgcggcatcggggcatttttatgcggcgctgaaagacgacaatgccctcatcgac
atggtgatgtggaaggggcaggcggcgcggctcgccttccggcccgaggacggaatcgag
gtgatcgctacgggtaagctcaccacctatccggggcgctccaaatatcagctcgtcgtc
gaaagcctggaggtcgcgggcgaaggcgcgctgatgctgctcttcgagaaattgaaggcg
cggctgggcggcgaggggctgttcgatcgcgacagaaagcagccgcttccctatctgccg
cgcacgatcggcgtcgtgacctcccccaccggcgcggtgatccgcgacattctccaccgc
ctcgccgaccgctgccccagccatgtgatcgtctggccggtgctcgtgcagggcgaaggc
gccgcggcgcaggtcgcggcggcgattcgcggtttcgacgcgctcgcgcccggcgggaag
gtagcccgccccgacctggtgatcgtcgcgcgcggcggcgggtcgatcgaggatctgtgg
gcgttcaacgaggaggtcgtcgtgcgcgcgatcgccgattgccgcatcccgacgatcagc
gcggtggggcatgaaaccgacgtgacgctcgccgactatgccgccgatatgcgcgcgccg
acgccgaccgccgccgccgagatggcggtgccggtgcgcgccgaactgcaagcgcagctg
gcgacgtggggcgggcggatgatcggcgccgcgaaccggcagcaggctttgcggggcgag
cggctgacggcgctcgcgcggcacctgccgcggcgcgacgcgctctatgcgccgcagcgc
cagcggctcgacgatgtcggcgagcggctgggccgcggacaaaggcagcggctggcgatg
ctgggcgagcggcttggcgcgcgcggcgcggcgctgcgcccggccctgcttgcgcgcgcg
tgggaccgcgaccgcgcgaagctcgacgggctggggcgcctgctcgcctcgctcgacccg
cgcgcactcttgtcgcgcggctatgcgatggtgcgcgatgctggcggagcgatcgtgacc
agcgcggcgaaggcgcgcgacgcggggcatctgcggctccagttcgccgacggcgagctg
cccgtgacggtcggggaggggggtgatccggcgccatcgtctggaccgcgcccggcgcgc
aaggcatcgccatctgcgccgaaagcggggcagggcgagctgttctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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