KEGG T05221: SMD44

Streptomyces alboflavus: SMD44_06457

Entry

SMD44_06457       CDS       T05221

Symbol

gyrB

Name

(GenBank) DNA topoisomerase IV subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

salf Streptomyces alboflavus

Brite

KEGG Orthology (KO) [BR:salf00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salf03032]
    SMD44_06457 (gyrB)
   03400 DNA repair and recombination proteins [BR:salf03400]
    SMD44_06457 (gyrB)
Enzymes [BR:salf01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SMD44_06457 (gyrB)
DNA replication proteins [BR:salf03032]
Prokaryotic type
  DNA Topoisomerases
   SMD44_06457 (gyrB)
DNA repair and recombination proteins [BR:salf03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SMD44_06457 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c

Other DBs

NCBI-ProteinID:

ARX86976

UniProt:

A0A1Z1WKK4

Position

7051341..7053464

AA seq 707 aa
MTAETSVPSTALLTGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGYCDHIEVILHDDASVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDVEVDRAGHTHAISFRRGVPGAFAKPGADAAFD
PAARLSKVKKIPKTRTGTRVRYWADRQIFLKDARLSLENLHQRARQTAFLVPGLTIVVRD
EFGLGEGGTKGEESFRFDGGISEFCEYLAQDKAVCDVLRFSGQGTFKETVPVLDDHGQMT
PTEVTRELGVDVALRWGTGYDTTVRSFVNIIATPKGGTHVTGFERSLTKTMNEALRAQKL
LRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAANRIVANVIAKELKAFLT
STKRDAKAQARSVMEKAVAAARTRIAARQHKDAQRRKTALESSSLPAKLADCRSDDVDRS
ELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKASVSDMLKNAECGAIIQVIGAGS
GRTFDIDAARYGKIILLVDADVDGAHIRILLLTLFQRYMRPMVEAGRVFAAVPPLHRIEL
VQPKKGQDKYVYTYSDRELRDTLLEFERKGVRYKDSIQRYKGLGEMDADQLAETTMDPRY
RTLRRINISDLESAEQVFDLLMGNEVAPRKEFITSSAATLDRSRIDA

NT seq 2124 nt +upstreamnt +downstreamnt
gtgaccgccgagacgtccgtgccgtccacagcgttgctgaccggagcagaccgggacggt
tccaactacaccgcgcggcaccttctcgtcctggaggggctcgaagccgtccgcaagcgt
ccgggcatgtacatcgggtcgacggacagccgcggtctgatgcactgcctctgggagatc
atcgacaactccgtcgacgaggccctgggcgggtactgcgaccacatcgaggtcatcctc
cacgacgacgcctccgtggaggtccgggacaacggccgcggcatcccggtcgacgtcgag
cccaagaccgggctctccggagtcgaggtcgtcatgaccaagctgcacgcgggcggcaag
ttcggcggcggttcgtacgcggcctccggcggcctgcacggcgtgggcgcctctgtggtg
aacgccctctcggcccgtctggacgtcgaggtggaccgcgccgggcacacgcacgccatc
agcttccgacgcggtgtccccggagccttcgccaagcccggcgcggacgcggcgttcgac
ccggcggcacggctgagcaaggtcaagaagatccccaagacccgcaccggcacgcgcgtg
cgctactgggccgaccgccagatcttcctcaaggacgccaggctcagcctggagaacctg
catcagcgcgcccgtcagaccgccttcctggtgcccggactgaccatcgtcgtgcgggac
gagttcggcctcggtgagggcggcacgaagggcgaggaatccttccgcttcgacggcgga
atcagcgagttctgcgagtacctggcgcaggacaaggccgtctgcgatgtcctccgcttc
tccggccagggcaccttcaaggagaccgtgcccgtcctcgacgaccacggccagatgacg
ccgaccgaggtcacgcgggagctcggcgtggatgtcgcgctgcgctggggcaccgggtac
gacacgacggtcaggtccttcgtcaacatcatcgccacccccaagggcggcacgcatgtg
accggcttcgagcggtcgctcacgaagacgatgaacgaggcgctgcgcgcgcagaagctg
ctgcgcgtcgccgaggacgacatcgtcaaggacgacgccctggaaggcctcaccgccgtc
gtcaccgtgcgcctcgcggagccgcagttcgaaggtcagacgaaggaggtcctcggcacg
tcggcggccaaccgcatcgtcgccaacgtcatcgccaaggagctcaaggcgttcctgacc
tccaccaagcgtgacgcgaaggcgcaggcgcgctccgtgatggagaaggccgtcgccgcc
gcccgcacacgcatcgcggcccgccagcacaaggacgcccagcgtcggaagaccgccctg
gagtcctcctcgctgcccgcgaagctcgccgactgccgcagcgacgacgtcgaccgcagc
gagctgttcatcgtcgagggagactccgccctcggcaccgccaagctcgcccggaactcc
gagttccaggccctgctgcccatccgcggcaagatcctcaacgtccagaaggcctcggtc
tcggacatgctcaagaacgccgagtgcggcgcgatcatccaggtcataggagccgggtcc
ggccggaccttcgacatcgacgcggcgcgctacggcaagatcatcctgctggtcgacgcc
gatgtcgacggcgcgcacatccgcatcctgctcctgaccctgttccagcgctacatgcgg
cccatggtcgaggcgggccgtgtgttcgccgccgtgccgccgctgcaccggatcgagctg
gtccagcccaagaagggccaggacaagtacgtctacacgtactcggaccgcgagctgcgc
gacaccctcctcgagttcgagcgcaagggcgtgcggtacaaggactccatccagcgctac
aagggcctgggcgagatggacgccgaccagctggccgagacgacgatggacccccgctac
cgcaccctgcgccggatcaacatctccgacctcgagtcggcggaacaggtcttcgacctg
ctcatgggcaacgaggtcgcgccgcgtaaggagttcatcacgagctcggcggcgaccctg
gaccgctcgcgcatcgacgcgtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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