KEGG   Shewanella algae: BS332_02790
Entry
BS332_02790       CDS       T05622                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
salg  Shewanella algae
Pathway
salg03410  Base excision repair
salg03430  Mismatch repair
salg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:salg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BS332_02790
   03430 Mismatch repair
    BS332_02790
   03440 Homologous recombination
    BS332_02790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salg03400]
    BS332_02790
DNA repair and recombination proteins [BR:salg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BS332_02790
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BS332_02790
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BS332_02790
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: AXQ13424
UniProt: A0A380AAQ8
Position
complement(588277..590001)
AA seq 574 aa
MIHKIVRRPRVDDSHLPANLHPLLKQIYASRGVQAPECELVLKRLLRPDTMLGLQQGAEL
VADAIAANRRILIMGDFDADGATSTSVCLLALRMMGMENCDYLIPNRFDYGYGLSPEIVA
VAHSKGAELLITVDNGISSIEGVRAAKALGMTVVITDHHLPGNELPEADAIINPNQPGCS
FASKSIAGVGVAFYLMLALRAELRKRHWFAKHSLAEPNLGVLLDLVALGTVADVVSLDAN
NRILVDAGIKRVRNGACRPGITALLEVARRNPARLVAADFGFAVGPRLNAAGRLDEMALG
VETLLCDDMLKARRMAAELDGLNAERRELETGMQQEAMKSLEALQLKESEQPWGIALYQP
DWHQGVIGILASRIKDRFHRPVIAFAEASDTEIKGSARSIKGLHMRDLLELINARHPGMI
LKFGGHAMAAGLSLRKDAFEQFAEAFDTCVRELLTLEDLNGELFSDGELPLECFSLDTAQ
LLRDAGPWGQAFPEPLFDGHFRILQQRLVAEKHLKLVLETECGRIMADAIAFNVDLKTWP
DASINHVRLLYKLDVNEFRGNSNLQLLVEQLEPL
NT seq 1725 nt   +upstreamnt  +downstreamnt
gtgatccacaaaatcgtccgtcgtcccagggtggacgacagccatttacccgctaatctg
catccgctgttaaaacagatttacgccagtcgcggcgttcaggctcccgagtgcgaactg
gtgctcaagcgtctgctcaggccggataccatgttgggcttgcagcaaggtgccgagttg
gtggccgatgccatcgccgccaatcgccgcattctgatcatgggtgatttcgatgccgat
ggtgccacttctaccagtgtgtgtctgttggcgctcagaatgatgggaatggaaaactgt
gattatctgatccccaatcgcttcgattatggctatggcctcagccctgaaatagtggcg
gtggcgcacagcaagggcgccgagctactgatcactgtcgataacggtatctcatccatc
gaaggcgtcagggccgccaaggcgctggggatgacggttgttattacagatcaccatttg
ccgggcaatgaattaccagaggcagatgccatcattaaccccaatcaacccggttgcagc
tttgcttccaagtcgattgccggggtcggggtggctttctatctgatgttggcgctgcgg
gctgagctgagaaaacgtcactggttcgccaaacactcgctggccgagcccaatctgggg
gtattactggacttggtggccctgggcacagtggccgatgtggtgtcgctcgatgccaac
aaccgtattttggtggatgccggtatcaagcgggtgcgaaacggcgcctgtcgcccgggg
atcaccgccttgctggaggtggcccgccgcaatccggcgcgtttggtggccgccgatttc
ggctttgcggttggccccagactcaacgccgccggaaggctggatgaaatggcgctcggg
gttgaaactctcttgtgtgatgacatgctcaaggcaagaaggatggcggccgagcttgat
ggcctcaacgccgagcgccgtgagctggaaaccggcatgcagcaagaagcgatgaagagc
ctggaggcgctgcagctcaaagagagtgaacagccctggggcatagccctgtatcagccg
gactggcatcagggggtgataggtattctggcttcccggatcaaagacaggttccaccgc
ccggtaatcgcctttgccgaagccagcgacactgaaatcaagggctcggcccgctccatc
aaggggctgcatatgcgcgatttgctggagcttatcaatgcccgtcatccggggatgatc
ctcaagttcggtggtcatgccatggccgccgggctctctttgcgtaaggatgccttcgag
cagtttgccgaggcctttgacacctgtgtccgtgagctgctgaccctggaagatctcaat
ggcgagctgttctccgacggtgaattgccgcttgaatgctttagcctggatacggcgcag
ctgcttagagatgccggtccctggggccaggctttccccgagccgttatttgatggccat
ttcagaattctgcagcagagactggtagcagagaaacaccttaaactggtgctggagact
gagtgcggccggatcatggccgatgccatcgcctttaatgtggatctcaagacctggcct
gatgccagcatcaatcatgtgcgtctgctgtataagctggatgtgaacgagtttcgcggc
aacagtaacctgcaattgctggtcgagcagctggagcccttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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