KEGG   Saliniradius amylolyticus: HMF8227_00901
Entry
HMF8227_00901     CDS       T05447                                 
Name
(GenBank) ECF RNA polymerase sigma-E factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
salh  Saliniradius amylolyticus
Brite
KEGG Orthology (KO) [BR:salh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salh03021]
    HMF8227_00901
Transcription machinery [BR:salh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HMF8227_00901
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 Phage_antitermQ HTH_16 HTH_38
Other DBs
NCBI-ProteinID: AWL11396
UniProt: A0A2S2E199
Position
951054..951632
AA seq 192 aa
MSEQITDQQLVERVQKGDKRAFNLLVEKYQHKVTHLVSRYVKNSGDVADVAQEAFIKAYR
ALPNFRGDSAFYTWLYRIAVNTAKNYLVAQGRKPPANDVDAEEADFYDGSEALKENSSPE
RTLMSEQMKTLLFDTVDSLPEELRVAITLREMEGMSYEEIATVMDCPVGTVRSRIFRARE
AIDKVIQPLLQQ
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagcgagcagataacagatcaacagttggttgaacgggtacaaaaaggggataagcgg
gcatttaacctgttagttgagaagtaccagcataaagtgacccatctggtgtcgcggtac
gtgaaaaactcaggggatgtggccgatgtcgctcaggaagcttttatcaaggcctaccgg
gctttgccgaactttcgtggcgacagtgcgttttacacctggttgtaccgaattgcggta
aataccgccaagaattatctggtggcccagggacgcaaaccacccgccaacgacgttgac
gccgaggaagcggatttctacgatggcagtgaagcgttgaaggaaaacagttcgcctgag
cgcacactgatgtcagaacaaatgaagaccttattgttcgacaccgtcgacagcttgccc
gaggagttgagggtagcgatcacgctgagggagatggaaggaatgagttatgaggaaatc
gccactgtgatggattgtccggtgggaacggtacgttcaaggattttccgggctcgggaa
gctatcgacaaagtgatacagcctctgttacaacagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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