KEGG   Salinarchaeum sp. Harcht-Bsk1: L593_07420
Entry
L593_07420        CDS       T02693                                 
Name
(GenBank) DNA repair helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
sali  Salinarchaeum sp. Harcht-Bsk1
Pathway
sali03022  Basal transcription factors
sali03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sali00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    L593_07420
  09124 Replication and repair
   03420 Nucleotide excision repair
    L593_07420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sali03021]
    L593_07420
   03400 DNA repair and recombination proteins [BR:sali03400]
    L593_07420
Enzymes [BR:sali01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     L593_07420
Transcription machinery [BR:sali03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     L593_07420
DNA repair and recombination proteins [BR:sali03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     L593_07420
SSDB
Motif
Pfam: ERCC3_RAD25_C ResIII Helicase_C SNF2-rel_dom DEAD AAA_22 AAA SLFN-g3_helicase AAA_33 AAA_25 AAA_5 nSTAND3 AAA_16
Other DBs
NCBI-ProteinID: AGN01429
UniProt: R4W9E3
Position
complement(1631712..1633790)
AA seq 692 aa
MTEDDAADAGAAESDVEAAEPTVELGEGEDAVDLAVDDVQTALQAIGQPFATADQLSREL
DVSQAAASDALDLLAERTTALERDDVSHDPVVYYPHAVADLAKTERVVPFPSRKEIVVDR
PRQFTRARLSQFARLVEADDGRYLYELRPEDVWAAPYDSLDALIGSLRAVLPDPEPALEG
WIADQWARAGKFRLYTHDDGYEVLEAESASLLSNVAEPKLEDGQLRARISDTGAWVAEEA
IAAVKRTLYEAGYPVKDERDLESGEPVEFDLNLQLRDYQQDWVERFEDAGAGVLVGPPGS
GKTVAAMGIMSAIGGETLLLVPSRELVSQWREELLTHTTLEPEQVGEYHGGTKQVRPITI
ATYHVAGMDRHRELFESREWGLLLFDEAHHVPAPVYRRSADLQSRHRLGLSATPVREGDD
EADIYTLIGPPIGTDWDQLFDAGYVAEPELELHFVPWPERAEAAESADTEPDATDSAAAG
DETATGTDPDAGPTDASVPTKPPESGPDAATVTAQDEYAASHGHERRQAAATNPAKIAHV
EALLAEHPTQQSLVFVDYLDQGEAIADAIDAPFLSGETRHAERERLLSSFRAGDLGTLVV
SRVGDEGIDLPEAEVAIVASGLGGSRRQGAQRAGRTMRPAGKAQVYVLATTGTEEEEFAR
QRTRHLAGKGVDVREVHVDAPGELASSDWAAE
NT seq 2079 nt   +upstreamnt  +downstreamnt
gtgacagaggacgacgctgcagacgccggtgcagccgagtcggacgtcgaggcggcggaa
ccgaccgtcgaactcggcgagggcgaggacgccgtcgatctcgccgtcgacgacgtccag
accgccctgcaggccatcggccagcccttcgcgaccgccgaccagctctcccgggaactc
gacgtctcgcaggccgccgccagcgacgccctcgacctgctcgccgaacgcacgacggcg
ctcgaacgcgacgacgtctcccacgatccggtcgtctactacccccacgccgtcgccgac
ctcgcgaagaccgaacgcgtggtgcccttcccctcgcgcaaggagatcgtcgtggaccgt
ccgcggcagtttacccgcgccaggctctcgcagttcgcccggctcgtcgaggccgacgac
ggccgctacctctacgaacttcgccccgaggacgtctgggcggcgccctacgacagcctc
gacgccctgatcggctccctccgggccgtccttcccgaccccgaacccgcacttgagggg
tggatcgccgaccagtgggctcgcgccgggaagttccggctctacacccacgatgacggc
tacgaggtgctggaagccgagtcggcgtcgctgttgagcaacgtcgccgagccgaagctc
gaggacggacagctccgcgcccgcatctccgacaccggggcgtgggtcgccgaggaggcg
atcgccgccgtcaagcgcacgctctacgaggcgggctaccccgtcaaggacgagcgcgac
ctcgaatccggcgagcccgtcgagttcgacctgaacctccagctccgggactaccagcag
gactgggtcgagcgcttcgaggacgctggcgccggcgtgctcgtcgggccgcccggctcg
ggcaagaccgtcgccgcgatggggatcatgagcgcgatcggcggggagacgctgctgctc
gtcccgagccgcgaactcgtctcgcagtggcgcgaggagctgctgacccacaccaccctg
gagcccgagcaggtcggcgagtaccacggcggcacgaagcaggtccgcccgatcacgatc
gcgacctaccacgtcgcgggaatggaccgccaccgggaactcttcgagtcccgcgagtgg
ggcctcctcctgttcgacgaggcccaccacgtcccggcgccggtctaccgccgcagcgcg
gacctccagtcccgacaccgcctcggcctctccgccacgcccgtccgcgagggcgacgac
gaggccgacatctacacgttgatcggcccgccgatcggcaccgactgggaccagctcttc
gacgccggctacgtcgccgagcccgaactggagctgcacttcgtcccctggcccgagcgg
gcggaggcggcggagtccgcagacacggagccggatgcgacagattcggcggctgccggt
gacgagacagccaccggaaccgaccccgatgctggacccaccgacgcgagcgtcccgacg
aaaccgccagaatcgggccccgacgccgcaacggtcaccgcccaggacgagtacgccgcc
agccacggtcacgagcgccggcaggcggcagccacgaaccccgcgaagatcgcccacgtc
gaggcgctgctcgccgagcacccgacccagcagtcgctcgtgttcgtggactacctcgac
cagggcgaggcgatcgccgacgccatcgacgcacccttcctctccggtgagacccgccac
gccgaacgcgagcggctcctgtcgtcgttccgcgccggcgacctcggcacgctcgtcgtc
tcccgggtcggcgacgagggcatcgacctcccggaggccgaggtcgccatcgtcgcctcc
gggctcggcggctcccgccgccagggcgcccagcgcgcgggccgcacgatgcgccccgcc
gggaaggcccaggtctacgtgctcgcgacgaccggcaccgaggaagaggagttcgcccgc
cagcgcactcgccacctcgcgggcaagggcgtcgacgtccgggaggtccacgtcgacgcg
cccggggagctggcatcgagcgactgggccgcggagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (33)   

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