KEGG   Salinimonas iocasae: FBQ74_00020
Entry
FBQ74_00020       CDS       T06006                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
salk  Salinimonas iocasae
Brite
KEGG Orthology (KO) [BR:salk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salk03032]
    FBQ74_00020 (gyrB)
   03400 DNA repair and recombination proteins [BR:salk03400]
    FBQ74_00020 (gyrB)
Enzymes [BR:salk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     FBQ74_00020 (gyrB)
DNA replication proteins [BR:salk03032]
 Prokaryotic type
  DNA Topoisomerases
   FBQ74_00020 (gyrB)
DNA repair and recombination proteins [BR:salk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      FBQ74_00020 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 UFD1
Other DBs
NCBI-ProteinID: QCZ91960
UniProt: A0A5B7Y962
Position
3878..6298
AA seq 806 aa
MSEQNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSE
INVQIHVDGSVSVSDDGRGIPTEMHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSSKLKLRIRRGGKTHEQEYQHGVPQAPLEVKGETDKSGTAVRFWPSDQTFTN
LEFHYDILAKRLRELSFLNSGVSIRLTDERDGKEDHFKYDGGIRAFVEYLNQKKTPMHDK
VFHFSAEREDGISVEVAMQWNDSFQENIFCFTNNIPQRDGGTHLAGFRGALTRTLNNYME
QEGLNKKAKMNATGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVRPAVESTMNEKLA
DFLLENPTESKIIAGKILDAARAREAARKARDMTRRKGALDLAGLPGKLADCQEKDPALS
ELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI
GRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGYVYIAQPPLYKVK
KGKQEQYLKDDDALINYLTNIALTGTSLYTSEDAPGISGAGLETLVKQYQGVEKMIERLY
RLMPPAILYRLIYSPTLNLEDLKDESTLNSVADKFIQSMNDKENDGATYRYEIRRDEELS
EFYIAIIMRMHGIDYEYKIGHDFIESSEYGRIKALNESINGMMGDTAYIQRGERKQSIDS
FKSAIEWLMNEAKKGQYIQRYKGLGEMNPDQLWETTMDPESRRMLQVTIEDAIGCDQLFT
TLMGDQVEPRREFIEANALKVENLDV
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgtcagagcagaacaattacgattcatccagtatcaaggttctcaaaggccttgacgct
gtgagaaaacgtcccggcatgtatatcggtgacactgatgacggcaccggcttacaccac
atggttttcgaggtggtagacaattccatcgatgaagccctggcaggacactgttcagaa
atcaatgttcaaattcatgttgatggttcggtatcggtctctgatgatggccgtggtatt
cctacagagatgcacccggaagagggcgtgtctgccgcagaagttatcatgacggtactt
catgctggcggtaagtttgacgacaattcctataaagtttcaggtggtcttcacggtgta
ggtgtatcggtggtcaacgcgctttcaagcaaattgaaattgcgtatacgtcgcggtggt
aaaacccacgagcaggagtatcaacatggtgttcctcaagctcctcttgaagtgaaaggt
gagacagataagtcgggaaccgcggtacgcttttggccaagtgaccagacatttaccaat
cttgaatttcattacgacattctggccaaacgcctacgcgaattatctttcctgaactct
ggtgtatctatccgtctaactgatgaacgcgatggtaaggaagatcatttcaaatatgat
ggcggtattcgtgcgtttgttgaatatctaaatcaaaagaaaacgccgatgcatgacaaa
gtgtttcacttttctgctgaacgtgaagacggtatttcagtcgaagttgctatgcagtgg
aatgatagtttccaggaaaacatcttctgctttactaacaatattccacagcgcgatggt
ggtacccaccttgctggttttcgaggcgctttaacgcgtactttgaataactatatggaa
caggaaggcctgaacaaaaaagcgaagatgaacgcgactggcgacgatgctcgtgagggc
ctgacagcggtagtttctgttaaggttcctgaccctaaattctcttcacaaaccaaagat
aagcttgtctcttcagaagttcggcctgcagtagagtcgaccatgaatgagaagttggct
gacttcctattggaaaacccaacagaaagtaaaatcattgctggtaaaattctggatgct
gcccgcgcaagggaagcggcgcgcaaggctcgcgatatgacacgccgtaaaggcgcatta
gatttagcaggattgccgggcaaactggccgactgtcaggaaaaagatccggcacttagt
gaattatatatagtggagggtgactccgcaggtggttcagcgaagcaggggcgtaaccgt
aaaaatcaggcgatccttccactgaaaggtaaaattctgaacgtagaaaaggcacgcttt
gataaaatgttgtcgtcgcaggaagtggcaacacttatcactgctctgggttgtggaatc
ggtagggatgagtataaccccgacaaattgcgttaccacagcattattatcatgaccgac
gccgatgtggatggctcgcatatccgaacgttgctattaacatttttctatcgtcaaatg
ccagaaatcattgagcgggggtacgtttacattgctcagcctccactatacaaagtgaag
aagggtaagcaggagcaatacctaaaagatgacgatgcgctgataaattacctgaccaac
atcgcactgacgggaacttctttatacaccagtgaagatgcccctggtatcagtggtgcc
ggtctggaaacgctggttaagcagtatcagggtgttgaaaagatgatcgagcgtttgtat
cgattgatgccacctgccattctttatcgattgatttactctcctacacttaatctggaa
gacctgaaagatgagtcgaccttaaacagtgttgcagacaagtttatccagagcatgaac
gataaagaaaatgatggtgcaacttaccgctatgaaatcagacgtgatgaagaacttagc
gagttctatatcgcgattatcatgcgaatgcacggtatcgattacgaatataagattggt
catgacttcatagaatcgagcgagtacggacgcattaaagcgcttaacgaatcgattaat
ggcatgatgggtgatacggcttatatccagcgtggcgagcgtaagcagtctattgactca
ttcaaatcagctatcgaatggttaatgaatgaggcgaagaaagggcaatacatacagcgt
tataaagggctgggtgaaatgaaccccgatcagttgtgggaaaccacaatggatccggaa
agtcgccgtatgcttcaggttaccattgaagatgcaatcggttgcgatcagctgtttacc
acgctcatgggtgaccaggttgagccgcgccgcgaatttatcgaagccaacgcactgaag
gtagaaaaccttgacgtgtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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