KEGG   Salinimonas iocasae: FBQ74_05770
Entry
FBQ74_05770       CDS       T06006                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
salk  Salinimonas iocasae
Brite
KEGG Orthology (KO) [BR:salk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salk03021]
    FBQ74_05770 (rpoE)
Transcription machinery [BR:salk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FBQ74_05770 (rpoE)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 Phage_antitermQ HTH_16 HTH_20 HTH_38
Other DBs
NCBI-ProteinID: QCZ93026
UniProt: A0A5B7YCN8
Position
1324570..1325148
AA seq 192 aa
MSEQITDQQIVEKVQSGDKNAFNLLVTRYQHKVMHLVSRYVKNTGDVADVTQDAFIKAYR
ALPNFRGDSAFYTWLYRIAVNSAKNYLVAQGRKPPANDVDAEEADYYEGSDALKEQSTPE
RSLLSSEIESTLFKVVEKLPDDLRMAITLREIEGMSYEEIANVMDCPVGTVRSRIFRARE
AIDKVIKPLLEN
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagcgagcagataaccgatcagcagattgtggaaaaagtacagagcggcgataagaac
gcttttaatcttttggtaacccggtatcagcacaaggtgatgcatttagtatcacgctat
gtgaaaaataccggagatgtggctgacgtcacgcaggatgcgtttattaaagcataccgt
gcattgcccaattttcggggcgatagtgcattttacacctggctttatcgaattgctgtc
aacagtgccaagaactatcttgtggcgcagggcagaaagccgcctgcaaacgacgtcgac
gcagaagaagctgactattacgaaggcagtgatgcgctcaaagagcaatcaacgcccgaa
agaagtctgttatccagcgagattgaaagtaccttattcaaagtggtggaaaagcttccc
gatgacttaagaatggcgattactttgcgcgaaatcgaaggcatgagctatgaagaaata
gccaatgtgatggattgtccggtgggtaccgtccggtccagaatatttcgggcgcgcgaa
gcaatagataaagtaataaaacccttgttagaaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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