KEGG   Salinimonas sp. KX18D6: FBQ74_06930Help
Entry
FBQ74_06930       CDS       T06006                                 

Gene name
recD
Definition
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
salk  Salinimonas sp. KX18D6
Pathway
salk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:salk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FBQ74_06930 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salk03400]
    FBQ74_06930 (recD)
Enzymes [BR:salk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     FBQ74_06930 (recD)
DNA repair and recombination proteins [BR:salk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FBQ74_06930 (recD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: AAA_30 AAA_19 UvrD_C_2 Viral_helicase1 AAA_11 Helicase_RecD SH3_13 AAA_22 UvrD_C UvrD-helicase DUF2075 PIF1 AAA_7 ResIII AAA_16 NACHT
Motif
Other DBs
NCBI-ProteinID: QCZ93236
UniProt: A0A5B7YD82
Position
1589018..1590880
Genome map
AA seq 620 aa AA seqDB search
MQLIAFPDTFTELADVELIDGYFASQFYCDSDAEHQRLWFMILVALSYHQRQGHTCLVVD
VLANTRLFEDAQSESKGWLFPAQPVLNEAVERAMSQCNYNDALCYEQGRLYTLRYWQFEN
DIASALSARIARIAPEPAHYERLRPIWPILFPATGAMLQDWQQIATAAALQQRFTIINGG
PGTGKTYTVTRLLLALQCMNSLSLNIQLAAPTGKAAQRMNESVSHALGQLQADLPPDLIS
SVSTDAVTVHRLLGISRYGVQTRHHAQSPLNCDVLIIDEASMVDTALMARIVRALPEHAA
LILVGDADQLPAVESGNVLEALINDQRNDEVSEPLSAHLKKLNPRLPALAISNQARDYVQ
TLKVSQRFSGDLSVVARGIRQGEADEAMAGISCLAALPDDIMAASDGVSMVSPDKFESGL
SVMAKQCFSAIAQSKSVTEALAAMQTCRWLTSTRRGPLGVEQLNLNIEQALGVIAAGAVS
RHYKGRPVMVTQNNYAQRLFNGDVGIIWPDENHQLKAWFETETGLRAVSLSRLPTVETVY
AMTVHKSQGSEFARVLMILAPPLSSQMAALNTRELLYTGLTRAKRACMLIATTSQFTQVV
NTRVQRHSGLASLMSQAGTK
NT seq 1863 nt NT seq  +upstreamnt  +downstreamnt
atgcagttaattgcttttcctgacactttcaccgaactggcagatgtcgagctaattgat
ggctattttgcctcacagttttactgcgattccgatgccgaacaccaacgcctgtggttt
atgattctggtggcgctgtcgtatcatcagcgtcaggggcatacctgtctcgtggttgac
gtattagcgaacactcgtctttttgaagatgcccagagcgaatctaaaggatggcttttc
cccgctcaacctgtgctgaacgaagcggtagagcgcgctatgagtcagtgtaattataac
gacgcgctgtgctatgaacagggacgtttatatacgctcaggtactggcagtttgaaaat
gatattgccagcgcactgagtgcgcgtatcgcgcgaatcgctcccgaaccagcccattac
gagaggctgcgcccgatttggccgattctgttcccggctacgggcgctatgctgcaagac
tggcaacagattgcaaccgctgccgcgctgcagcagcgtttcaccattatcaatggtggt
cccggtaccggaaaaacctacacggtgacacggttattgcttgccttacaatgcatgaat
agtctctcgctgaatattcagcttgctgcaccgacaggtaaggccgcacagcgcatgaat
gagtcagtatctcatgcattgggtcagttacaggcagatcttcctccagatttaatcagc
agcgtttccaccgacgccgtgaccgtgcacaggttgttggggatttcgcgctatggcgta
cagactcgtcatcatgcacagtcaccactgaactgtgatgtgctcattattgacgaagcc
tccatggtagatactgcattgatggcccgtattgtaagggcattacccgagcatgccgca
cttatactggttggcgatgcagaccagctgccagcggtcgagtcgggtaatgtgctcgaa
gcactgattaacgatcagcgcaacgacgaggtgtctgagccactttctgcacaccttaag
aaactgaacccgaggttaccggcgctagcgatcagtaatcaggcacgtgattatgtccag
accctaaaagtcagccagcgtttcagcggcgatctgtcagtagttgcacgggggatcagg
cagggagaggctgacgaagctatggcgggtatatcttgtcttgcagcattacccgacgac
attatggctgcttcagacggcgtgagcatggtctcaccggataaatttgaaagcggactg
agcgtcatggctaaacaatgtttttctgctattgcccaaagtaagagcgtcacagaagca
ttagctgcaatgcagacatgtcgctggctgacatcaacccgccgcggtccgttaggggtt
gaacaacttaatctgaatattgaacaggcactgggtgtcattgctgccggtgctgttagt
cgccattataagggacgcccggtgatggttacacagaataactatgcacagcgactgttc
aatggcgatgttggcattatctggccagatgagaatcaccagctgaaagcctggtttgaa
accgaaacaggtttgagagcggtcagcctgagtcggttgccaacagtagaaacggtttac
gccatgacggtgcacaagtctcagggctcagagtttgcccgggtgctgatgattctggcg
ccgccgctcagtagccagatggcggcgctgaatacccgcgagctgctgtatacggggctg
acaagggccaaacgggcctgcatgcttattgctaccacctcgcaatttacccaggtagtg
aatacccgggtacaacgacactcagggcttgcttcgctgatgtcgcaagccggtacaaaa
taa

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