KEGG   Salinimonas sediminis: D0Y50_05290
Entry
D0Y50_05290       CDS       T05624                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
salm  Salinimonas sediminis
Pathway
salm00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:salm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    D0Y50_05290 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:salm01007]
    D0Y50_05290 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:salm03016]
    D0Y50_05290 (lysS)
Enzymes [BR:salm01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     D0Y50_05290 (lysS)
Amino acid related enzymes [BR:salm01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   D0Y50_05290 (lysS)
Transfer RNA biogenesis [BR:salm03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    D0Y50_05290 (lysS)
 Prokaryotic type
   Other AARSs
    D0Y50_05290 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: AXR05842
UniProt: A0A346NJY5
Position
1168768..1170309
AA seq 513 aa
MTDQQNDENRLIAERRAKLSAIRENCESNGFPNNFRREHYADELQQQYGEQDKETLAEQQ
NQVSIAGRIMAKRGPFLLLQDMSGRIQSYASKDAQKDIKARYGSLDIGDIIGVSGALHKS
GKGDLYVDMANYQLLTKALRPLPEKFHGLSDQETKYRQRYVDLITSEKTRETFRIRSALI
NGIRNYLTERNFIEVETPMLQVIPGGASAKPFTTHHNAMDIDMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYHDLMNLTEDMLRTLAQDILGSAKL
VNTVRNADGEVVEEKHYDFGQPFARLSMGDAILKYWPDANAEAIRDPQNHLPELKAMAKQ
LHIKEPEVDGIWGPGKYLCEIFEATAEEQLEQPTFITEYPWEVSPLARRNDANPFITDRF
EFFVGGRELANGFSELNDAEDQAERFRKQVQEKDAGDDEAMHYDEDYIRALEHGLPPTAG
QGIGIDRLAMLFTDSPTIKDVILFPHMKPEVQE
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgaccgaccaacaaaacgatgaaaaccgattaattgccgagcgccgggctaaactgagc
gcaattcgagaaaactgtgaatctaatggctttccgaataactttcgccgtgaacactat
gcagatgaactgcaacaacagtatggcgaacaagataaagaaacgctggcagagcagcag
aatcaggtcagcattgctggccggataatggcgaaacgtgggccatttttactattacag
gatatgagtggccggattcagtcctatgcatctaaagatgcgcaaaaagacattaaggcg
cgctatggttcgctggatatcggagacattattggcgtatccggcgcgttgcataaatcg
ggaaaaggggatttgtacgtcgatatggcaaactatcagctcctgactaaggcgctgcgc
ccattgcccgaaaaattccatggcctgagcgatcaggaaaccaaatatcgtcaacgttat
gttgacttgattaccagtgaaaaaacccgtgaaacctttcgcattcgtagtgccttgatt
aatggtatccgtaattatctgaccgagcgcaacttcattgaggtagaaaccccaatgttg
caggtgatcccgggcggagcaagcgctaagccatttaccacgcatcataatgcgatggat
atcgacatgtatttgcgcattgcgcccgagttgtaccttaagcgcctggtggtaggtggt
ttcgagcgggtattcgagataaaccgtaatttccggaatgaaggcttgtctacgcgccat
aacccggaatttaccatgttggaattttatcaggcttatgctgattaccatgacctgatg
aatttaaccgaagacatgctgcgcacgctggcgcaggatattttgggtagcgctaagctg
gtgaataccgtgcgtaatgcagatggtgaagtggttgaagagaagcattacgactttggt
cagccctttgcgcgattaagtatgggcgatgccatacttaaatactggccagacgctaat
gccgaggccatccgcgatccgcaaaaccatttaccagagctaaaagcgatggcgaagcag
ttgcatattaaagagcctgaggtagatggtatttgggggccgggtaaatacctgtgcgaa
atctttgaagccacggctgaagagcaactggagcaacctacctttatcacagagtacccg
tgggaggtttcaccacttgcgcgtcgtaatgatgctaatccgttcattactgaccggttt
gagttttttgtcggcggtcgagagctggccaatggctttagcgagttaaatgatgccgaa
gaccaggctgaacgtttccgtaagcaggtccaggaaaaagacgctggcgacgacgaagct
atgcactatgacgaagattatatccgggccctggagcacggactgcctcctacagcaggg
cagggaattggtatcgatcggctggcgatgttgttcaccgacagccccaccatcaaggat
gttattttatttccgcacatgaagccggaagttcaggaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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