KEGG   Salinimonas sediminis: D0Y50_08885
Entry
D0Y50_08885       CDS       T05624                                 
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
salm  Salinimonas sediminis
Brite
KEGG Orthology (KO) [BR:salm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:salm03009]
    D0Y50_08885 (rimO)
Enzymes [BR:salm01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     D0Y50_08885 (rimO)
Ribosome biogenesis [BR:salm03009]
 Prokaryotic type
  ribosomal protein modification factors
   D0Y50_08885 (rimO)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2
Other DBs
NCBI-ProteinID: AXR06470
UniProt: A0A346NLR3
Position
complement(1974796..1976256)
AA seq 486 aa
MTVEKYTPNQTTTLSGPADVLRSQQSDTAMTDHQSPRIGFVSLGCPKNLVDSERILTQLR
TEGYDVVPTYNDADLVIVNTCGFIDAAVEESLDTIGEALKENGRVIVTGCLGIKDDEIRE
VHPNVLAVTGPHAYEEVVNQVHTHLPKPAHNPFADLVPDHGIKLTPRHFAYLKISEGCNH
RCTFCIIPSMRGDLVSRPVGEILDEAKRLKAGGVNELLVISQDTSAYGVDVKHQTGFWDG
MPVKTHLKQLCQKLGGMDMWVRLHYVYPYPHVDDLIPLMNEGKILPYLDIPLQHANKRIL
RLMKRPGSADRTLERIRKWREICPELIIRSTFIVGFPGETEEEFEELLTFIREARLDRVG
CFMYSPVEGAKANELADPVPEEIKQARHQRFMEIQESISAQKLQERIGKEYLIVIDSVDA
EGATGRTFADAPEVDGIVHLNGVYDVKPGQRVWAEIIHADNHDTWAVPVEDELEEEADSA
HSAVME
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgacagtagagaaatacaccccaaaccaaaccaccacattaagtggtcccgctgacgta
cttagaagtcagcaatctgacactgctatgacggaccaccaaagtcccagaattggcttt
gttagcttgggctgccctaaaaacctggtcgattcagagcgtattttaacgcagttgcgc
actgaaggttatgatgtggtccccacctataacgatgctgatttggtaatcgttaatacc
tgtggttttattgatgcggcggtagaagagtcgctcgatactattggcgaagccctgaaa
gaaaacggccgggttattgtcaccggttgtctgggcatcaaagatgacgaaatacgtgag
gtccaccccaacgtcctggcggtaaccggcccgcacgcttatgaggaagtggtaaatcag
gtacatacccacttgcccaaaccggcgcacaatccgtttgccgacttggtgcctgaccat
ggaatcaagcttaccccacgccattttgcttaccttaaaatttcagaaggctgcaaccat
cgttgtacattttgtatcatcccctcgatgcgcggcgatttagttagccgtccagtcgga
gaaattctggatgaagcgaaacggctgaaggcaggtggagtcaatgaactgttggttatt
tcgcaggataccagtgcttatggcgttgatgttaagcatcaaaccgggttctgggatggg
atgccggtaaaaacgcatcttaagcagttatgccagaagctggggggcatggatatgtgg
gttcgcttgcattatgtatatccatacccgcatgtggacgacctgattccattgatgaat
gaaggcaaaatactgccctacctggatattccattacagcacgccaataaacgtatcctt
cgcttaatgaagcggccaggtagtgctgatcggacgcttgaacgaattcgcaaatggcgg
gaaatctgtcctgagctgatcattcgctcaacgttcatagtaggtttcccaggggaaacc
gaagaagagtttgaagagttactgacctttattcgtgaagcacggctggaccgtgtaggc
tgttttatgtattcaccggtagagggagccaaagcaaatgaattggcagaccccgtacca
gaggaaattaaacaggcgcgccatcaacgattcatggaaatccaggaaagtatcagtgcc
cagaaactacaagagcggattggtaaagaatacttgattgtgattgacagcgttgatgct
gaaggggctaccggacgcacttttgctgatgccccggaggtagatggtattgttcaccta
aacggtgtgtatgacgttaaacccggtcaacgggtgtgggcagaaataatccatgccgac
aatcacgatacctgggctgttcctgttgaagatgaactcgaagaggaagctgattctgcc
cacagcgccgtgatggaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system