KEGG   Salinimonas sediminis: D0Y50_13120
Entry
D0Y50_13120       CDS       T05624                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
salm  Salinimonas sediminis
Brite
KEGG Orthology (KO) [BR:salm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salm03021]
    D0Y50_13120 (rpoE)
Transcription machinery [BR:salm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D0Y50_13120 (rpoE)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 Phage_antitermQ HTH_16 HTH_38
Other DBs
NCBI-ProteinID: AXR07207
UniProt: A0A346NNV0
Position
complement(2958491..2959069)
AA seq 192 aa
MSEQMTDQQIVEKVQSGDKNAFNLLVTRYQHKVMHLVSRYVKNSGDVADVTQEAFIKAYR
ALPNFRGDSAFYTWLYRIAVNSAKNYLVAQGRKPPASDVDAEEADYYEGSDALKEQSTPE
RSLLSSEIETTLFRVVEKLPDDLRMAITLREIEGLSYEEIANVMGCPVGTVRSRIFRARE
AIDKVLQPLLEN
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagcgagcagatgaccgatcaacagattgttgaaaaagtacaaagcggcgataaaaac
gcgttcaatctgctagttactcgttatcagcacaaggttatgcatttggtatcacgttac
gtcaaaaattctggcgatgtagcggatgtaacccaggaagcatttattaaagcctatcgt
gcgttgcccaattttcgtggcgacagcgcgttttatacctggctttatcggatcgcggta
aacagtgccaaaaattatttggttgctcaaggccgcaagccacctgccagcgatgttgat
gcagaggaggctgactactacgaaggcagtgatgcgctcaaagagcaatccacaccggaa
cgcagtctgttatccagtgagattgaaactaccttattccgggttgttgaaaaactgccc
gatgatttgcgcatggcgataaccctgcgtgaaatagaagggttaagttatgaagaaata
gcgaacgtgatgggctgtccggtagggacggtacgttcacgaatttttcgggccagggaa
gcaatagataaagttctgcaacccttgttagaaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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