KEGG   Salinimonas sediminis: D0Y50_18335
Entry
D0Y50_18335       CDS       T05624                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
salm  Salinimonas sediminis
Pathway
salm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:salm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    D0Y50_18335 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salm03400]
    D0Y50_18335 (uvrA)
DNA repair and recombination proteins [BR:salm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     D0Y50_18335 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      D0Y50_18335 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase AAA_22 AAA_21 AAA_23 SLFN-g3_helicase DnaJ_CXXCXGXG nSTAND3 NACHT AAA_25 T2SSE cobW Viral_helicase1 ScfRs
Other DBs
NCBI-ProteinID: AXR08137
UniProt: A0A346NRI0
Position
4183948..4186782
AA seq 944 aa
MDKIEIRGARTHNLKNVDLTIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLMFARVGTPRC
PDHDVTLDAQTVSQMVDKVLAMPEGAKLMLLAPVVQDRKGEHVKMLQNLAAQGYIRARID
GEVCDLSDPPELDLHKKHTIEVVVDRFKVRDDLQLRLAESFETALELSGGNAKIADMDDA
SIPEIVFSANFACPHCGYSLSELEPRLFSFNNPAGACPTCDGLGTRQFFDPSRILTNDEL
SLSGGAIRGWDKRSYYYFQMLQAVADHYEFDLTKPFGELAKKDQDIVLYGSKGKSLKFKY
INDRGDIMERKHPFEGVIPNMERRYRETESNAVREELAKYLSQQPCTTCGGSRLREEARN
VFIQETNLPKIADMSIAGAFEFFESLDLVGQKAQIAEKILKEIQDRLSFLINVGLNYLSL
SRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTRLRDLGNT
VLVVEHDEDAIREADFVIDIGPGAGVHGGEVIAAGSLDDILNCEDSLTGKYLSGRERIEI
PAERTPTDKDKWLVLEGATGNNLQSVSLNIPVGLMTCVTGVSGSGKSTLINDTFYRIAQR
ELNNATANEPAPHTAMSGLEHLDKVVDIDQSPIGRTPRSNPATYAGIFTPIRELFAGTQE
ARSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEIQY
KGQNINEVLSMTVEEAREFFDPIPSIARKLQTLMDVGLAYIKLGQSATTLSGGEAQRVKL
AKELSKRDTGQTLYILDEPTTGLHFHDIRQLLAVLHRLRDHGNTVVVIEHNLDVVKTADW
VVDLGPEGGSGGGLIIAEGTPETVSETSGSHTGRFLKPLLDQQR
NT seq 2835 nt   +upstreamnt  +downstreamnt
atggataaaatcgaaatacgtggtgcccgcacccacaatctgaagaacgtcgatttgaca
atccccagagacaagctggtggtaataaccggtttgtccggctcaggaaaatcctcgctg
gccttcgacaccctctatgcagaaggccaacgacgctatgttgagtcgctgtcggcgtat
gcgcgacagtttttgtcaatgatggaaaaaccggatgttgaccatatcgagggcttgtca
ccggccatttctattgaacaaaaatccacctcacataacccccgttccaccgtgggtaca
attaccgaaatttacgattacctgcgtttgatgtttgcccgtgtcggcaccccgcgttgt
cctgatcacgatgttacgcttgatgcgcaaactgtgagtcagatggtagataaagtgttg
gcaatgcctgaaggcgcaaagcttatgttgctggctccggtggttcaggaccgtaaaggt
gagcacgtcaaaatgctgcagaatctggcagcgcaaggatacattcgggcgcgtatcgac
ggcgaagtgtgtgatttgtccgacccaccagagctggacttacacaaaaagcacactatt
gaagtggtggttgaccggtttaaagtccgtgatgacttacagctgcgcttagcggaatct
tttgaaactgccctggagttatctggtggtaatgcaaaaattgcagatatggacgatgcc
agtatcccggaaatcgtgttttccgccaattttgcctgcccccactgcggctacagcctt
agtgagttagagccccggttattttcctttaacaacccggctggcgcatgcccaacttgt
gatggcctggggacccggcagttttttgaccccagcagaattttgaccaatgacgagcta
agtctgtctggcggggccattcgtggctgggataaacgcagctattactactttcaaatg
cttcaggcggtcgccgaccactatgaatttgacctgacaaaaccttttggtgagctggcg
aaaaaggaccaggacatcgttttatacgggtctaagggcaagtcgttaaagtttaaatat
attaacgaccgcggcgatatcatggagcgtaagcatccgtttgaaggagttatccctaat
atggagcgccgctatcgggaaaccgagtctaacgcggtgcgggaagaactggctaagtac
cttagtcaacagccttgcactacctgcggtgggtcgcggttacgggaagaggcccgcaat
gtttttattcaggaaaccaacctgcccaaaatagcagatatgtctatcgccggtgccttt
gagttttttgagtcgttggacttggtgggccaaaaagcccaaatagccgaaaaaattcta
aaagaaattcaggaccgcttgagctttttgatcaatgtggggctgaattatttgagttta
tcgcgcagtgccgacacgctctcgggcggggaggcgcagcgaattcggctagccagccaa
attggcgcaggcctggtgggtgtaatgtatgtactggatgagccatctatcgggctgcat
cagcgtgacaacgaacggctgctgaaaaccctcacccgcttacgggatctgggcaatacg
gtattggtggtagaacacgatgaagatgctattcgcgaagcagactttgttatcgatatc
ggccccggggccggggttcatggcggtgaagttattgccgcaggatcacttgatgatatt
ttaaattgtgaagactcacttaccggcaaatatctgtcgggccgtgaacgtattgaaatt
cccgccgaacgtacaccgactgataaagataaatggttggtgctggaaggggcgaccgga
aacaatctgcaatcagtgtcgctgaatattccggtggggctaatgacctgcgtaaccggc
gtgtcagggtcgggtaaatctaccttgattaatgataccttttatcggattgctcagcgc
gagctaaataatgccaccgccaatgagcccgctccccatactgcgatgagtggtctggaa
cacctggataaagtagtcgatattgaccaaagccctataggccgtacaccacggtctaac
ccggccacctatgcaggcatttttacgcccattcgcgagctgtttgccggtacccaggaa
gcccgctcccgcggttacaagcctggccggtttagctttaatgtgaagggcgggcgctgt
gaagcctgtcagggcgatggcgtaattaaggtcgagatgcactttttacctgatgtctat
gttccttgcgatgtatgtaaaggtaaacgctacaatcgtgaaacattagaaattcagtat
aaaggccagaatattaatgaagtattgagcatgactgtggaagaggcgcgggaattcttt
gacccgataccgtccattgcccgcaagctacaaaccttaatggatgtcggcttggcctat
attaaattaggccagtcggccacgacactttcaggcggtgaagcccagcgggtgaaattg
gctaaagagctgtctaaacgggataccggccaaaccctgtatatactggatgaaccgact
accggtttgcacttccatgatatacggcagttgttggcagtgttgcaccgtctacgggat
cacggcaataccgtcgtcgtcattgaacacaatctggatgtggtgaaaaccgctgactgg
gtagtggaccttggccctgaaggaggctcaggtggtggccttatcatcgctgaaggtaca
ccggaaacggtgtcagaaaccagcggttcccacaccgggcgcttcttaaaacccctgtta
gatcaacagcgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

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