KEGG   Salinisphaera sp. LB1: SALB1_2368
Entry
SALB1_2368        CDS       T05476                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
saln  Salinisphaera sp. LB1
Pathway
saln03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:saln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SALB1_2368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:saln03400]
    SALB1_2368
DNA repair and recombination proteins [BR:saln03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SALB1_2368
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SALB1_2368
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase AAA_23 DnaJ_CXXCXGXG AAA_22 BCA_ABC_TP_C nSTAND3 Viral_helicase1 cobW NACHT AAA_21 AAA_30 ExoX-like_C
Other DBs
NCBI-ProteinID: AWN16566
UniProt: A0A2Z3J5L8
Position
complement(2566124..2569072)
AA seq 982 aa
MESHIRIRGARTHNLANINVDLPRDQLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLSMMEKPDLDSIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARAGTPF
CPHHDEPLAAQSVSEMVDQTLTKAAESAWMLLAPVIRSRKGEHREIFEQMRGQGFVRMRV
DGEIIELDENVPELDPKKKHDLEVVVDRFKVRDGIQQRLAESFETALRLSEGIAWIMPWA
VEAEPEVFSSRFACPVCGYSINDMEPRMFSFNSPHGACPTCDGLGSQSVFDVDRVITDDS
LSLAGGAVRGWDRRNPYFFGLIESLAETYGFDVDTPWRDLPDPARKVILNGSGGKKIEFR
YVNARGNTRRRKHAFEGVLDNMQRRYAETDSLAVREELAKYLSDKACPTCDGARLNEAAR
HVRVADKTLPEINAASISGAYEIADNLTIRGHRAEIAAPILKEINQRLKFLLDVGLNYLT
LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNRRLLNTLERLRDLGN
TVIVVEHDEDAIREADYVVDMGPGAGDHGGQLIAQGTAAEIAAHPDSLTGQYLSSRLTIP
IPDRRIAYDAKRQIRIRGARGNNLKNVDAAFCMGQLTCVTGVSGSGKSTLINETLFPAAA
RQVNRAVARAAPVTAIDGLEHLDKVIDINQAPIGRTPRSNPATYTGLFGTIRELFANTPE
ARARGYKPGRFSFNVKGGRCETCQGDGVIKVEMHFLPDIYVTCETCHGARYNRETLEVHY
KGKTIAEVLDMRVEAAAEFFAPVPSLKRKLDTLIDVGLSYVKLGQNATTLSGGEAQRIKL
ARELSKRDTGRTLYLLDEPTTGLHFHDIKHLLEVLLRLREAGNAVVVIEHNLDVIKTADW
LIDLGPEGGSGGGEIIATGTPEDVAEVAASHTGQFLKPMLGDARPGTGHNTAGDKRDLAL
PPKKEKKTRKSPGRPKNNATAS
NT seq 2949 nt   +upstreamnt  +downstreamnt
atggaaagtcatatccgcatccgcggcgcgcggacgcacaatctcgccaacatcaacgtc
gacctgccccgcgatcagttgatcgtgatcaccggcctgtccggttcgggcaagtcgtcg
ctcgccttcgacacgatctatgccgagggccagcggcgttacgtcgaatcgttgtcggcc
tatgcccgccagttcctgtcgatgatggaaaaaccggacctggattccatcgagggactg
tcgccggcgatctcgatcgagcagaagtcgacttcgcacaacccgcgctcgacggtgggc
acggttaccgaaatccacgattacctgcgcctgttgttcgcgcgcgccggcacgcccttc
tgcccgcaccacgacgagccgctggccgcccagagcgtgtcggaaatggtcgaccagacg
ctgaccaaggcggccgaatccgcctggatgctgctcgcaccggtgatccgctcgcgcaag
ggcgagcatcgggagatcttcgagcagatgcgcggccagggcttcgtacgcatgcgcgtc
gacggcgagatcatcgagctcgacgagaacgtgcccgaactcgatcccaagaagaaacac
gatctggaagtcgtggtcgatcgcttcaaggtgcgcgacggcatccagcagcggttggcc
gagtcgttcgagaccgcgctgcggctgtcggaaggcatcgcctggatcatgccctgggcc
gtagaggccgagccagaggtgttttcttcccggttcgcctgtccggtctgcggttattcc
atcaacgacatggaaccgcggatgttttcgttcaactcgccgcatggcgcctgcccgacc
tgcgacggcctgggctcgcagagtgtgttcgacgtggatcgggtgatcaccgacgacagc
ttgagtctggccggcggcgcggtacgcggctgggaccggcgcaacccgtatttcttcggc
ctgatcgaatcgctggccgaaacctacggcttcgacgtggacacgccctggcgcgatttg
ccggacccggcccgcaaggtgattctgaacggctccggcggcaaaaagatcgagttccgc
tacgtcaacgcgcgcggcaacacgcgccgtcgcaagcatgccttcgagggcgtgctcgac
aacatgcagcgccgctatgccgagaccgattcgctggcggtacgcgaggaactggccaag
tatctgtcggacaaggcctgcccgacctgcgacggcgcgcgtctgaatgaggcggcacgg
catgtccgcgtcgccgacaagaccctgcccgagatcaacgcggccagtatttccggcgcc
tacgagatcgccgacaacctcacgattcgcggccatcgcgccgagatcgcagcccccatc
ctcaaggagatcaaccagcggctgaaattcctgctggatgtcggactgaattatctgacc
ctgtcgcgcagcgccgagacgctttcaggcggcgaggcccagcgcattcgcctggccagc
cagatcggcgccgggctggtgggcgtgatgtatgtgctggacgaaccgtccatcggcctg
caccagcgcgacaaccgccgcctgctgaatacgctggaacgcctgcgcgatctcggcaat
accgtgatcgtggtcgagcacgacgaggacgccatccgcgaggccgactacgtggtcgac
atgggcccgggcgcgggcgatcacggcggccagctcatcgcccagggcacggcggccgag
atcgccgcgcacccggattcgctgaccggccagtatctgtcgtcccggctgaccattccg
atccccgacaggcggatcgcttacgacgccaagcgccagatccggatccgcggcgcgcgc
ggcaacaatctcaagaacgtggatgccgcgttctgcatgggccagctcacctgcgtgacg
ggcgtatccggctcgggcaagtcgacgctgatcaacgagaccctgttcccggccgccgcg
cgtcaggtcaatcgggccgtggcgcgcgccgcgccggtgaccgcgatcgacggcctggag
catctggacaaggtcatcgatatcaaccaggcgccgatcgggcgcacgccgcgctccaac
ccggccacctataccggcctgttcggcactatccgcgagctgttcgccaacacgccggaa
gcccgggcccgcggttacaagccggggcggttttcgttcaacgtcaagggcggacgctgc
gaaacctgtcagggcgacggcgtgatcaaggtggaaatgcatttcctgccggatatttac
gtcacctgcgagacctgccacggcgcgcgctacaaccgcgaaacgctggaagtccattac
aagggcaagaccatcgccgaggtactggacatgcgggtcgaggcagccgccgagttcttc
gccccggtgccgagcctcaagcgcaagctggacacgctgatcgacgtcggcctgtcctac
gtcaagctgggccagaacgcgaccacgctgtccggcggcgaggcccagcgcatcaagctc
gcccgcgagctatccaagcgcgataccgggcgcacgctctatctgctggacgaaccgaca
accggcctgcacttccacgacatcaagcatctgctggaggtactgctgcgcctgcgcgag
gccggcaacgccgtggtcgtgatcgagcacaatctggacgtgatcaagaccgccgactgg
ctgatcgatctcggcccggaaggcggctcgggcggtggcgagatcatcgccaccggcacg
ccggaggatgtggccgaggtggcggcatcgcacaccggacagttcctcaaacccatgctg
ggcgatgcacggcccggcaccggccacaacaccgctggcgacaagcgcgacctggcgctg
ccgccgaaaaaagagaagaaaacccggaagtcccccggccggccgaaaaacaacgccacc
gccagctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (27)   

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