KEGG   Silicimonas algicola: EF888_08480
Entry
EF888_08480       CDS       T05779                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
salo  Silicimonas algicola
Pathway
salo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:salo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EF888_08480 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salo03400]
    EF888_08480 (xth)
Enzymes [BR:salo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     EF888_08480 (xth)
DNA repair and recombination proteins [BR:salo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     EF888_08480 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AZQ67165
UniProt: A0A316G877
Position
complement(1705335..1706114)
AA seq 259 aa
MRIATFNINGVRARIEAVTAWLTESAPDVALLQEIKSQDEGFPREHFEDLGYTVHTHGQK
GFNGVAILSKLPLEDVTRGLPGDETDEQARWIEATVIGIRAVRVCGLYLPNGNPAPGPKY
DYKLAWMARLKSRAEALLETEEPVVICGDYNVIPQDEDAARPAAWREDALALPASRAAFR
EILNLGYTDAFRVRHAGGGHYSFWDYQRNAFDRNDGIRIDHHLLSPQAADLLNDCWIEAA
VRGREKPSDHVPVWIDIDA
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcgcatcgccaccttcaacatcaacggcgtccgggcccggatcgaagccgtcaccgcc
tggctgaccgaaagcgcgcccgacgtggcgctcctccaggagatcaagtcgcaggacgag
ggtttcccgcgcgagcatttcgaggacctgggctacaccgtccacacccacgggcagaag
ggcttcaacggcgtcgcgatcctgtcgaagctacctctcgaggacgtgacgcgagggttg
cccggcgacgagaccgacgagcaggcgcgctggatcgaggcgaccgtgatcgggatacgc
gcggtgcgcgtctgcggcctctacctgccgaacggcaatcccgcaccgggtccgaagtac
gactacaagctcgcctggatggcgcggctgaagtcccgcgccgaggcgctgctcgagact
gaggagcctgtggtgatctgcggcgactacaatgtcattccccaggacgaggacgccgca
agacccgcagcgtggcgcgaggatgcgctcgccctgcccgccagccgcgccgccttccgc
gagatcctgaacctcggctacaccgacgccttccgggtccgccacgcgggcggcgggcac
tacagcttctgggattatcagcgcaacgccttcgaccggaacgacggcattcgcatcgac
caccacctgctgtcgcctcaagctgccgacctgctgaacgactgctggatcgaggcggcc
gtgcgggggcgagagaagccttccgaccacgttcctgtctggatcgacatcgacgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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