KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111950334
Entry
111950334         CDS       T05762                                 
Name
(RefSeq) HMG box transcription factor BBX isoform X1
  KO
K21643  HMG box transcription factor BBX
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:salp03000]
    111950334
Transcription factors [BR:salp03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    111950334
SSDB
Motif
Pfam: DUF2028 HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 111950334
NCBI-ProteinID: XP_023823598
Position
LG23:13156076..13198105
AA seq 883 aa
MKGGGRGKEPPVEVSCKRPKRKCLQWHPLLSKKALDFSEEEEEDEEELEKEPLLVRETRG
PKVPCGGPMEGEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAV
LEPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPCHTVSNTRNKVWSFPSNSPK
GCATAKKVPKTDSTPQLNFAMADPTKMGGLSMLLLAGEHALTAREISSSSSQSGATDVTK
YPDKSSLFQLAEISSSTRQPSLMDTAGKGKPLSWGDQVEMWSGTSQLGKPDVPTANVKSP
LFQLGEQISSDSSQSTAPEGKQCGQSALFQLAEMCLASEAGKMETQDDTCTPHIKTETVV
EEAGDNTPDLPLSFPPSSSSMPTDASLLLLSGQAAIIKKKKDASTREPAKVVDKDKSPGP
GSPKKTLKKRPSSESELESLFYTIEAVAKGAWGDAEEDIPKKKARTAAVTILVESSSPKK
RAKPKAKRPLKAKEDERNVKDKEDDGCIELPLTVETVVNPASPKTEAKEANISSSTEEPT
SPPSPPRIKHKVGERELEANAEGCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRG
SFRSASDEGGWTDETWAFSQMGPSNFKKLKKSKSKDETAPGLGKLEEEFEKKFNSLPQYS
PLTFDKKSTVVTKKKTDINTALEEQPPKPAKGPSPSQKNTLFHKIVSKYKEKKEKPNTLD
KDIAMRSDSPMLDSAAKATKAKPSPAPCTTATLNPEAMGTSPSVPVGSQKRKARKSKITH
LVRSADGRVSPAEEDKARDLTPEQDDKPLSQDTLCNETGCYSASKQEEADRSSAPEDLPA
FFSLAALAEVAAMENIHRGQHVIGDSQKKDMAKTPVLISCADQ
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgaaaggtggaggaagaggtaaggagccgccggtggaggtgagctgcaagcggcccaag
cgcaagtgtctacaatggcacccgctactctccaagaaggccctggacttttcagaggag
gaagaggaggacgaagaagaactagagaaggagccattgttggtcagggagacccggggg
ccgaaggtgccatgcggggggcccatggagggggaagaggactcttcagagcagcgggcc
cgccggcccatgaatgccttcctgcttttctgcaagcgccaccgatcgctggtgaggcag
gaacaccctcgactggacaaccgtggtgccaccaagatcttggctgactggtgggccgtg
ctggagcccaaagagaaacagaagtacaccgacatggccaaggagtacaaagatgccttc
atgaaggctaacccgggctacaagtggtgccctgccaccaacaagccagtcaagagcccc
tgccacactgtcagcaacacccgcaataaagtgtggtccttcccttccaactcccctaag
ggttgtgccactgccaagaaagtgcccaagactgacagcacaccacagcttaacttcgcc
atggcagatcccacgaagatgggtggcctaagcatgctactgttggctggggagcatgcc
cttactgccagagagatttcctccagctcatcacaatctggagccacagatgtcactaag
taccctgataaatcctccctattccaacttgctgagatctcttccagcacgcgtcagccc
agtttaatggacaccgctggcaaagggaagcccttgagttggggggaccaggttgaaatg
tggtctggaacctcacagctgggaaagcctgacgtacccactgccaatgtcaagtcccct
ctttttcaactgggagagcagatctcctctgattcgagccagtcgactgcaccagaggga
aagcagtgtggccagtccgctctcttccagcttgctgagatgtgcttggcctccgaggca
gggaagatggagacacaggacgatacctgcaccccacacatcaaaactgagacggtggtc
gaggaggctggggacaacacccctgatcttcctctctcctttcccccgtcttcctcctcc
atgccgaccgatgctagtctcctgctgctcagcggccaagcggccataatcaaaaagaaa
aaagacgccagcaccagagagccggccaaagtggtggacaaagacaagagccctggtccc
ggctcgcccaaaaagaccctcaagaagcgaccgtcatccgagtcggagttggagagcctc
ttctacactatcgaagccgtggctaaaggggcctggggcgacgccgaggaggatataccc
aagaagaaggctcgcaccgccgccgttaccattctggtagagtccagctcacccaaaaag
agggccaagcccaaagccaagaggcccctgaaggctaaggaagatgagagaaatgtgaag
gacaaagaggacgacggatgcatagagcttccattgacagtggagacggtggtgaatcca
gcaagccccaagacagaggctaaggaggccaatattagcagcagcacggaggagcccacc
tcccctcccagccccccgcgcatcaagcacaaagtcggggagagggaactggaggccaac
gcagaggggtgtggctccagaaagtctgagagaagctgcaagggggcgctgtacaagacc
ctggtttcggaagggatgctgacctcactgagggccaacgtggacagaggcaaaagaggt
tcttttcgaagtgcatctgatgaaggaggctggactgacgagacctgggctttctcacag
atgggacccagtaatttcaagaagcttaagaagtccaaatctaaagacgagaccgcgcca
ggtttagggaaactagaggaggagtttgagaagaagttcaacagcctgccgcagtacagc
cctctgacattcgacaaaaagagcactgtcgtcaccaagaagaaaactgacattaacacc
gccctggaggaacaacctccaaaacctgccaagggtccatctccatctcagaaaaatact
ttattccacaagattgttagcaaatacaaggagaaaaaggagaagcccaatactttggac
aaagacatagcgatgcgtagtgactcccccatgttagactcggctgccaaggccacaaag
gcaaagccgagcccagccccctgtaccaccgccacgctgaacccagaagccatgggaact
agccctagcgtgccagtgggcagccagaaaaggaaggccaggaagagcaagatcacacac
ctggtgcgctcggccgatggcagggtgtccccagccgaagaggacaaagccagggacctg
accccggagcaggatgacaagccattatcccaagatactttatgcaatgaaacagggtgt
tacagcgcatccaagcaagaggaggcagacaggagcagtgcacctgaagacctgcctgcc
ttctttagcctggctgcccttgcagaggtggcagccatggagaacattcacagaggccag
catgtgattggtgacagccagaagaaggacatggccaagacccctgtgctcatctcctgc
gctgaccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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