KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111951638
Entry
111951638         CDS       T05762                                 
Name
(RefSeq) vinculin isoform X1
  KO
K05700  vinculin
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510  Focal adhesion
salp04520  Adherens junction
salp04810  Regulation of actin cytoskeleton
salp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:salp00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111951638
   04520 Adherens junction
    111951638
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111951638
   04810 Regulation of actin cytoskeleton
    111951638
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:salp04812]
    111951638
   04147 Exosome [BR:salp04147]
    111951638
Cytoskeleton proteins [BR:salp04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     111951638
Exosome [BR:salp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111951638
SSDB
Motif
Pfam: Vinculin DUF3080 NEMO Mob_Pre
Other DBs
NCBI-GeneID: 111951638
NCBI-ProteinID: XP_023825616
Position
LG3:complement(16505600..16560301)
AA seq 1129 aa
MPVFHTKTIEGILEPVAQQISHLVIMHEDGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENACSKLVQAAQMLKADPYSVPARDFLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLFNSLNTVKQLLPVLISAIKIFVATKSTHSAGVDEAERNRCFTFEKMSAE
ISEIIRVLQLTTWDEDTWANKKDIECMKRSLAVIEAKMALAKGWLKDSHGQPGEPGDVAV
RVILDEAGKVGELCAGKERRDALGTAKTLGQMTDQVTELRVRGHGPSPPCVQRAGQCSQG
LDLLLGKVDSATRRLEALTKAKLAFARRLDAAQAWLADPNGGPEGAENIRALLANAQNIA
DLCEDLFERDDIQRSINEIAGLTARLVELRKRGKGDSPEARALCKLIGAALLTLQAKTNR
AVANMRPAKPAITLQGKMEQALRWVNNPGQDDRGVGQAAIRGLVSEGRRLAGGLGGPYRQ
DMIVRCDRNEALMTSLADIAGRGEAEAPQAKATASQLQESLKDLKGRMQEVMTQEVSDVF
SDTTTPIKLLAVSATAPPEAPHREEVFDERAGNFEAHAGRLGATAEKAAAVGSANKNTVE
GIQATVKHSRELTPQVTSAARILLKNPGNQAAYEHFDTMKNQWIDNVEKLTGLVDEAIDT
KSLLDASEEAIKKDIDKCRVAIANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPWF
RESVKRASDILSHTISPMVIDAKAVAGNIQYPALQKAFLDSCLRILAAVGKVREAFSLPE
PDFPPPPPDLDKLHVSDQEQAPPKPPLPEGEVPPPRPPPPEEKERDKDEDFPEQKAGELL
SEPMMVAARQLHDEARKWSSKPEEEEGVEVDDEDEFTDGEDDYEPELLMMPSNGNAVNQP
ILAAAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRAMIQCAKDIAKA
SDEVTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESE
QATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgccggtgttccacacgaagaccatcgagggcatccttgagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggacggggaggtggacgggaaggccatcccggatctg
accgttccggtggccgcggtacaggcagcggtcagtaaccttgtcagggtgggaaaggag
actgttcagaccacagaggaccaggtgatgaagagagacatgcctcccgccttcataaag
gtggagaatgcgtgttctaagcttgtgcaggcagctcagatgttgaaggcggatccctac
tcggttcctgccagagacttcctcattgacggttctagaggaatcctgtctggaacctca
gacctgctgctcactttcgacgaagctgaggtgcgtaagatcattcgtgtgtgtaagggg
atcctggagtatttgactgtagctgaggtggtagagaccatggaggacctgatcacctac
accaagaacctaggaccaggtatgactaagatgtctaagatgattgaggagcgacagcag
gagttgacccatcaggaacacagacagatgctattcaactccctgaacactgtcaaacaa
ctactgcctgtactcatatcagccataaagatctttgtagcgactaagagcacacatagt
gctggggttgatgaggcagagagaaacagatgctttacgtttgagaagatgagtgctgag
attagtgagatcatccgagtcctacagcttaccacctgggatgaagacacatgggccaac
aagaaggacattgagtgtatgaaacgttctctggcggtgatagaggctaagatggccctg
gcgaaaggctggctcaaagactcccatggacaaccaggcgagcccggggatgtagcggtg
cgtgtgatattggatgaggcagggaaggtaggagaactgtgtgctggaaaggaacgcaga
gacgcactgggaacagcaaagactctgggacagatgaccgaccaggtcacagagctacgt
gtcagaggacatggtccgtctccaccatgtgttcagcgggccggtcagtgttctcagggt
ctggacctgctgcttgggaaagtggacagcgccacccgcaggctcgaggctttaactaaa
gctaaactggcattcgctaggagactggatgctgcccaggcatggctggcagatcctaat
gggggtccagagggtgcagaaaacatcagagccttgctggccaatgcccaaaacattgct
gacttgtgcgaagacctcttcgagagagacgacatccagagatccatcaatgagattgcg
gggctcaccgcacgactagtggagctacgcaagcggggtaaaggggacagtccagaggcg
cgtgcgctatgtaaactcattggagcagctctcctgaccctgcaggcaaagaccaacaga
gcggtggccaacatgagacctgccaaaccagccatcactctgcaaggcaagatggagcag
gccctacgctgggtcaacaaccctggacaggatgacaggggtgtgggtcaggcagcaatc
cggggcttggtatcggagggccgccggttggctggagggctgggggggccgtaccggcag
gacatgattgtccgctgcgatcgcaacgaggcgctgatgacatcactggcagacatagcg
gggaggggagaggccgaagccccgcaggctaaagctactgcttcacaactacaggaaagt
ctgaaggacttgaagggtcgtatgcaggaagtaatgacccaggaagtatccgatgtgttc
agtgacaccaccacccccattaaactactggccgtgtctgcgactgcccccccagaggcc
ccgcacagagaggaggtgtttgatgagcgtgctggtaactttgaggcccatgcgggtcgc
ctgggcgcaacagcggagaaggcggcggccgtgggatcagccaataagaacacagttgag
ggaatacaggctaccgttaaacactccagagaactcactccacaggtgacctccgcagct
cgtatcctgttgaagaatccaggtaaccaggcggcctacgaacactttgacaccatgaag
aaccagtggatcgacaatgtagagaaactcactggtctggtggatgaagccatagacacc
aagtctctgctggatgcgtctgaggaggcgataaagaaggacatcgataagtgtcgtgtc
gccatagcaaatgtacagccgcagatgctagttgccggggcgaccagcatagctcggcga
gcaaatcgcgtactactggtagcgaagagagaggtggagaactcagaggacccatggttc
agagaatcagtgaaacgtgcatcagatatactcagccacacaatatcacctatggttata
gacgctaaggctgtggccggaaatatacagtacccagcccttcagaaggcatttttagat
tcttgcctcagaattctggctgctgttgggaaggtcagagaagccttcagcctcccggaa
ccagacttcccccctccacccccagacctagacaagctacacgtgagtgatcaggagcag
gccccccctaagccccccctaccagagggagaggtgccccctcctcgccccccacctcca
gaggagaaagagagagacaaagatgaagactttccagagcagaaggcaggagagctgctc
agtgagcccatgatggtggctgctaggcaactacatgacgaggcacgcaagtggtccagc
aagcctgaggaagaggagggtgtagaggtagatgatgaagacgagtttactgacggtgag
gatgactatgagccagagctgttgatgatgccgtctaacggcaatgccgtaaatcaaccc
atcctagccgccgcacaatcgcttcatcaggaggcgcgcaagtggtccagcaagggaaat
gacatcattgcggcagccaagaggatggcattgctgatggctgagatgtcccggttggta
cgcggcggcagcggtaataagcgggctatgatccagtgtgctaaagacattgccaaagcc
tcggatgaggtcaccaggctggccaaagaggtggccaagcagtgtactgaccgacgcatc
agaaccaacctgctgcaggtgtgtgagcgtattcccaccatcagtactcagctgaagatc
ctgtcaacagtcaaagccaccatgctgggacgaaccaacatcagcgaggaggagtctgaa
caggctacagagatgctggtccataatgcacagaacctgatgcagtcagttaaggagacc
gtgagagaggccgaggctgcttcaatcaagatccgcaccgatgcaggcttcaccctgcgc
tgggtccgcaagaccccctggtaccagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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