KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111955092
Entry
111955092         CDS       T05762                                 
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
  KO
K11653  AT-rich interactive domain-containing protein 1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111955092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:salp03000]
    111955092
   03021 Transcription machinery [BR:salp03021]
    111955092
   03036 Chromosome and associated proteins [BR:salp03036]
    111955092
Transcription factors [BR:salp03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    111955092
Transcription machinery [BR:salp03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     111955092
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    111955092
SSDB
Motif
Pfam: BAF250_C ARID
Other DBs
NCBI-GeneID: 111955092
NCBI-ProteinID: XP_023830936
Position
LG30:complement(11362527..11415644)
AA seq 2319 aa
MAAQVASVATLNTSPPSELKKPDRDPLEESVPGEKQHVNKEPGSDNGSPGQKDLQDGADA
GNVGGGGEPDMKNGNGNSSRVNNNNNQNDTGGPEGNNHPGMGHHXQGSFPPPPYGYNQHY
SRGPFHQHGGQQSPGMAAAAGPAVQPGNMMDPYPPNSHXHGFPNHFNNYSPFPNRTSYQG
QGYAMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNIGNLQPTSTPTLNQLLTS
PSSTRTYQNYPQGDYSNQEGASKGAADMASSQYGGGHPGWQQRTHHPPPMSPGNTGPGNT
GPLNRNQPPSPMDQAGKMRGQGYGGVNPYSQQQGQGQGPPPPGAQQGASYPGQGYGPPGA
QRYPMGMQGRTPGGMGGMQYGQQMAGYGQQGPGGYGQQSQGYYGQHGPPPHAGQQQSPYP
QQVHPSQGQPSAQHSQPGAPGPYPQGQGPPQVGPPQIQPPYNQGPQQPGPQQGQAVPQGQ
GPQPSYPQQQGPQGQGQQPPQQQLPSQQQGPPQQQERAAPPQAQPPPGHQQPPGHQPSPG
HQPPPSHGGQQPPTGHQPSPGPQGHHPSPGHGGPPQQQGQSQQGQPSPYSQTPPLQQSPF
QRFPPPPQELSQDSFSSQSSAPPSNQPMTSTKSGAEDSMQGRPSSLPDLSGSIDDLPTGT
EGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRSGP
LSPAAVPGIQMPARPPSAHSDSIHSSMNQSAMGQDRVYMRNPQMPPYGSPQQPGSALSPR
QSSGGQMHPGMGPYPQNNSMGNYGPQGGQYGPQGYPRQPGYSGMPNANYPGGPGGMNPMP
GQAGGAPYAGMPPGRMGPGQMGARPYGPGMGPNMGPGMPPQVTSGMCPPPGMNRKVPGGP
PDAASAMHHGGPGANSIHNRPPGYPPNMPQGMMGSGSPYGPGPGAINSMQGMLNQGGPYG
GGPMGGNMANNTPGIVPSPEFGIDVKLNPAQKMNNKVDGTPKPETKKVKKKSNSSTTTNE
KITRLYELGPEPERRTWVDRYLAFTEEKATGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQ
VNKNKKWRELSTNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDLFIDAKKTTQ
PKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPMPGVRLQDPFAD
GGDPAFARRNSMTPNSYQPGMGGPEMMGRMGPYEPNKDPFGGMRKAGEQFMTPALGPNSG
MEGQFNRGPPGPMGPNMQMGQRQQYPYVPGYDRRQEPGMGPDGSMGPGAPQPNLMPSGAD
SGMYSPSRPPPVQRHDSYGNQYPGQGAPPGGPYPNQQPGMFPQQQPNYKRSPGDGAYGPP
AKRHEGDGMYNVPFSGQQQPGPQPSGAPQGQQDMYNQYNTGYPGSDRRPPGPQGQFPFPF
GRDRGPSSGGPNSQSPMPPQMMGSPMQAAPDGPQCPMWQGRNEMGYPNYPNRQGPPGPGQ
GPPQGYHGMNRSEEMMPGADQRINHEGQWPGHPSQRQPPYGPGGSGPPMSRPLQSNYQSS
QNHISQVSSPAPMPRPMESRTSPSKSPYMHSGIKMQKAGPPVPASHIGQAPVQPPLIRRD
ISFPPGSVEASQPILKPRGKLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDD
NSISTFNLCQLPGFLELVVEYFRRCLIEIFGILKEYEVGDPGQRMLIDPHAADEDCSDEE
LPEQEDMEEDEEEEEDEEEEERKSNADTTTSSQQVQVKQEGVGKEEKSTTEKLTAEEERE
GGESSSSSPAPQDSSLPQEKPKQASKFDKLPIKMVRKKDPFPGCRSSKLGRRQSFDSGLI
HWSIGGGDTTEHIQTHFESRSNLLKQRKRVPPSVTESRKKVAVTVSEHPEKTKPGKEQTT
FPAEKTTKTSAPTTPAPVTATIDDVLSARPGSVTEEAVRGAAEEQKENGGKFLFSIRQAQ
QSRRNITILEDEPHSKDETPLSTLSDWQDALARRCICVSNIVRSLSFIPGNDLEMSKHPG
LLLLLGRLVLLHHRHPERKQAPVTYEKEEDEDERVSCERDEWWWDCLEVLRENCLVTLAN
ISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFPMLGPHGALSPQRLVLETLSKLS
IQDNNVDLILATPPFSRLEKLYGTLVRLVGERKVAVCREMSVVLLANLAQGDSMAARAIA
VQKASVGNLLGFLEDSLAATQYQQSQSSXMHLQGAHFEPTRVDMMRRAARALHAMAKVEE
NHSEFTLYESRLLDISVSPLMNSLVSHVICDVLFLIGQS
NT seq 6960 nt   +upstreamnt  +downstreamnt
atggccgcgcaggtcgctagcgtcgccactctcaacactagcccgccatccgaacttaaa
aagccggatcgggacccactggaggagtcggtaccgggagagaaacaacatgtaaataaa
gaaccgggatctgacaacggatctccgggacagaaggatctgcaggacggggccgatgct
ggaaatgtagggggaggaggggagcctgacatgaagaacgggaacgggaattcgtccagg
gtgaataataataacaaccagaatgatactgggggaccggaggggaataaccaccccggg
atgggccatcackaccagggctcattccctccacctccttacggttacaaccagcactac
agccggggcccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcg
gggccggcagtgcagccaggtaacatgatggacccatacccgcccaactcacacgascac
ggcttccccaaccattttaacaactacagccccttcccyaaccggacttcttatcagggc
caaggatacgccatgaattccccgcgtaataaccagcccccggcggctggggggcagcca
ggcaagcaacagccagcaggcggaactacagctatggctgcctcgtacaataatcagagg
tataacataggaaacctacaacccacgtctaccccgactttaaatcagctcctaacgtct
cccagctcaacgaggacctaccagaattacccacaaggagactatagtaaccaggaaggg
gctagcaagggagcagcagatatggccagcagtcagtatggtgggggccatccgggttgg
caacaaaggacccaccatccgcctccaatgagcccagggaacacgggacctgggaacacg
ggacctctgaacagaaaccagccccccagccctatggaccaggcagggaagatgcgaggc
cagggatacggtggagtcaacccctactctcagcagcaaggccaggggcagggccctcct
cctccaggggctcaacagggtgcctcctacccaggccagggctacggacccccaggggct
cagagatacccaatgggcatgcagggacgcacccccggcggcatgggtggcatgcaatac
ggacaacagatggccggctatgggcagcagggtccagggggctacggtcagcagagccag
ggctactacggccagcatggccccccaccacacgctggtcagcagcagtccccctacccc
cagcaggtccacccctcacagggtcagccctcagcccaacacagccagcctggggccccc
ggcccctatccccagggccaagggcctccgcaggtgggtccacctcagatccagccgccc
tacaaccagggaccgcagcagccgggtccccagcagggccaggccgtgcctcagggtcag
ggcccccagcccagctaccctcagcagcaaggaccccaagggcaagggcagcagcctcca
cagcagcagctcccctcgcagcagcaaggacccccccagcagcaagaaagggcggcccct
ccacaggcccagccacccccgggccatcaacaaccaccaggccaccaaccctctccaggc
caccagccaccccctagccatggtgggcagcagccacccacaggccatcagccctccccg
ggcccccagggccaccacccttctccaggtcacggtggacccccccagcagcagggtcag
tctcagcagggccagccctcaccctactcccagaccccacccctgcagcagtcgcccttc
cagcggtttccacctccgccgcaggagctctcccaggactcgttcagctcccagtccagt
gctcccccctccaaccagcccatgacttccacaaagagtggagcagaggacagcatgcag
ggacggccttctagcttaccggacctctctggttctatagatgacctgccgacgggtacg
gagggagctctgagtccgggcgtcagcacgtcgggggtgtccagtagccagggggaacag
agtaaccccgcccagtcacccttctcaccccacacctcgccccacttgcctggcatccgc
gggccctccccctcccccgtgggctcccctgccagcgtgaccccctcccgctctggaccc
ctttcacctgctgccgtgccaggtatccagatgcctgcccggccacccagcgcccattca
gacagcatccactcatccatgaaccagtcagccatgggccaggacagggtgtacatgcgt
aacccccagatgcctccgtacgggtcgccacagcaacctggctccgccttatccccccgc
cagtcgtcgggaggccagatgcatcctgggatggggccctaccctcagaacaactccatg
gggaactacggccctcagggcggacagtacggaccacaaggctaccccagacagcctggc
tacagtggcatgcccaacgccaactaccctggaggtccaggaggcatgaaccctatgcca
ggccaggctggtggggcgccgtacgcaggcatgccccccggcaggatgggtccaggtcag
atgggtgctcgcccctacggccctgggatgggccccaatatgggccctggcatgccccca
caggtgacctctgggatgtgtccccctccaggcatgaacaggaaggtccccgggggccct
ccggatgcagcctccgccatgcaccacggtggccccggagccaactctatacataacagg
cctccaggctacccccccaacatgccccaggggatgatgggatcagggtctccgtacggc
ccggggccgggggccatcaacagcatgcagggcatgttgaaccagggaggaccctatgga
ggagggcccatgggagggaacatggccaacaacacacctggcattgttcctagccctgag
tttggcatcgatgtcaaactgaacccagcccagaagatgaacaacaaggtggacggcacg
cccaaacctgaaaccaagaaggtaaagaagaagtcaaactcttcgacgacgaccaatgag
aagataactcgtctgtatgagctgggtccagagccggagaggaggacgtgggtagaccgg
tacctggcgttcactgaggagaaggccacgggcatgaccaaccttcccgccgtgggacgc
aaacctctggacctcttcagactttacgtctcggtcaaagagataggaggcctcacacag
gtgaacaagaataagaagtggagggagttgtccaccaacctgaacgtgggcacgtccagc
agcgccgccagctccctgaagaagcagtacatccagtgtctgtacgccttcgagtgcaag
atcgaacgtggcgaggacccgcccccggatctcttcatcgacgccaaaaagaccacccag
cccaagatccagccccccagcccagctgggtctggatctctgcagggcccccagacyccc
cagtccaccagtagttccatggcggaggggggggacctgaagccccccaccccagcctcc
acccctcacagccagataccccccatgccaggagtcaggctgcaggatccgtttgcagac
gggggcgacccggcgtttgccagacggaactctatgacccctaacagctaccagcctggg
atgggtggtccggagatgatggggcgcatggggccctatgaacccaacaaggaccccttt
ggtggcatgaggaaagctggagagcagttcatgactccagcgttgggccctaacagtggt
atggaggggcagttcaacagaggccccccagggcccatgggccccaacatgcagatgggt
cagagacaacagtacccctatgtacctggatatgacaggagacaggaaccagggatgggt
cctgacggcagtatgggtcctggagctccccagcccaacctgatgccttcaggggccgat
tcggggatgtactcccccagccgacccccaccggtgcaacggcatgattcctatggtaat
cagtatcctggccaaggagcgccacctggtggcccctaccccaatcagcagccaggaatg
tttccacagcaacaaccgaactataagcgttctccaggcgacggggcctacggtccccca
gcgaagcgtcatgagggggatgggatgtacaatgtccccttcagcggtcagcagcagcca
gggccccagccctctggagccccccagggccaacaggacatgtacaatcagtacaacaca
ggttaccccggctccgaccgccgaccacctggaccccagggccagttccccttccccttc
ggccgagaccgggggccctctagcggtggcccaaactcccagtcccccatgcctccccaa
atgatgggcagcccaatgcaggcggcccctgacggccctcagtgtcccatgtggcaggga
cgcaacgagatgggctaccccaactaccccaaccgccaggggcctccaggacctggccag
gggccaccccaggggtaccacggcatgaaccggtctgaggagatgatgccaggggcagac
cagcggattaaccacgagggccagtggccgggacaccccagccagagacaacccccttac
gggccggggggctcgggtccccccatgtccagacctctgcagtccaactatcagagctcc
cagaaccacatatcccaggtgtccagtcctgcccccatgccccgccccatggagagccgg
acgtcaccctccaagtcgccctacatgcactcaggcatcaagatgcagaaggcggggccc
cccgtgcctgcgtcccacataggccaggcccctgtgcagccccctctcatcaggcgggac
atatccttccccccagggtcggtggaggcctcccaacccatcctcaaacccagaggaaaa
ctcaccatgaaagacatcggcaccccagaggcctggagagtgatgatgtcactgaagtca
ggcttactagctgagagcacttgggccttggacaccattaatattctactgtacgatgac
aacagcatttctactttcaacctctgccagctgcctgggttcctggagctggtagtggag
tatttcagacgctgcctcatcgagatctttggcatcctgaaggagtatgaggtgggagac
cctggccagaggatgctcatcgacccgcatgctgccgacgaagactgctctgacgaagag
ctacctgagcaggaggacatggaggaggacgaggaagaagaagaggacgaggaggaggag
gagaggaaaagcaacgcagacaccaccacctcgtcgcagcaggtccaggtgaaacaggag
ggggtggggaaagaggagaaatccacaacggagaagttgacagcagaggaggaaagggaa
ggaggagagtcttcttcctcctccccagcccctcaggactctagcctcccccaggaaaaa
cccaaacaggccagtaagttcgacaagctacccatcaagatggtgcgtaagaaagacccc
ttccccggttgccgttccagtaaactaggccggcggcagagctttgacagcggactgatc
cactggagtatcggcgggggggacaccacggaacacatccagacccacttcgagagccgg
tccaacctcctcaagcagcggaaacgggtgccgccgtcagtcaccgagagcaggaagaag
gttgccgtgactgtgtcagaacaccctgagaagaccaagcctggcaaggagcagaccacc
ttccctgcagagaagaccaccaagacctccgccccaaccacacctgccccggtcaccgcc
accattgacgacgtcctgtcggcccggccgggctcagtgacggaggaggcggtgcgagga
gcagccgaggagcagaaggagaacgggggaaagttcttgttctccatccgccaggcgcag
cagagccgacgcaacatcaccatcctggaggacgagcctcacagcaaggacgagacccca
ctgagcacgctgtcggactggcaggatgccctggcccgccgctgcatctgcgtctccaac
attgttcgatcgctctccttcatccccggcaacgacttggagatgtccaaacacccaggg
ctgctgctgctgctgggccgtctggtcctgctccaccaccgtcacccagagaggaaacag
gcccccgtcacctacgagaaggaggaggacgaggacgagagggtgagctgtgagagggac
gagtggtggtgggactgtctggaggtcctcagggagaactgcctggtcactctggctaac
atctccggccagttggacttgtccatctacccagagagcatctgtctgcccctgctggac
ggcctgcttcattgggctgtttgtccttcggccgaggccctggaccctttccccatgctg
gggccccatggggccctatccccccagagactggtgctggagaccctcagcaagctgagc
atccaggacaacaacgtggaccttatcctggccacgccgccgttcagccggctggagaag
ctgtacgggacgctggtgcgcctggttggggagaggaaggtggctgtctgcagggagatg
tctgtggtcttactggccaacctggcccagggagacagcatggcggccagggccatcgcc
gtgcagaaggccagcgtaggtaacctcctgggcttcctggaggacagtctagcagccacy
cagtaccagcagagccagagttccktgatgcacctacagggggcmcactttgagcccacr
agrgtggacatgatgcggcgagcggcccgcgccctgcacgccatggctaaggtggaggag
aaccactcagagttcaccctgtatgagtcccgcctactggacatctctgtctcaccactc
atgaactctctggtgtcccatgtgatctgtgacgtactctttctgattggccagtcatga

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