KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111956035
Entry
111956035         CDS       T05762                                 
Name
(RefSeq) tripartite motif-containing protein 46 isoform X1
  KO
K12022  tripartite motif-containing protein 46
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:salp04121]
    111956035
Ubiquitin system [BR:salp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    111956035
SSDB
Motif
Pfam: zf-B_box COS zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_4 SPRY zf-C3HC4_3 zf-RING_5 fn3 IBR
Other DBs
NCBI-GeneID: 111956035
NCBI-ProteinID: XP_023832223
Position
LG31:complement(914638..942159)
AA seq 786 aa
MAPRFXLKSNVKSIECELHCPVCKEIVKQPVVLPCQHSVCLMCASEVLVQNGYPPPELPP
EPNSPASTPNTRSPRQARRPMPSKADHRPIDRVLRSGFGTYPSPGRRRKEPPPPAMLFPC
PPCGREVELGEKGLTDCLRNLTLERIVERYRHTVSLGSVAVMCQFCKPPQSLEATKGCAD
CQASFCNECFKLYHPWGTPRAQHEHVQPTLNFRPKVLSCPEHDQERLHFYCRTCQRLLCP
LCKLRRVHAGHKVAPVAQAYQTLKDKITKEMNYILSNQETVLGQISQLESATTQTEANSV
AAREQLSQSVRDLTALLAERHASLSQALEGARQRRGEALAGQVAERRSLLEHAGLMAFSQ
ELLKETDPPCFVQAARQTHSRLSTSIEGLQCFSLAADPSFRHFQLDVSKELKLLTDLQFI
QAPLAPVIDTQKTLAYDQLFLCWRLPQESAPAWHFSVEFRRRGVVPGGGARGGIQGRLAA
ARWGWQRLEEVGGTSAVIDRLEMDSVYVLRVRGCNKAGFGEYSEEVYLHTPPAPVLNFYL
DSRWGLHADRLVVSKEQRCARSVPGLSLMQAADRALTSCHLTADLLVGDVAITQGRHYWA
CSVEPGSYLVKVGVGLEAKLQDWFHLPQDMASPRYDPDSGHDSGAEDSLESPPPFSFLTM
GMGKIFLPQAPNHHNNHGCNGTNPRRSPTIANGNSPASSPTGLTYPLPPRLGVCLDFEKG
RVTFYDAHSLRPLWEGPVDCSGPVCPAFFFIGGGALQLQELVANRMADQTPVRRVTIQSR
VTNLNN
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggcgcctagattccasctgaagtctaacgtgaagagcattgagtgcgagctgcattgc
ccagtgtgtaaggagatcgtcaagcagcccgtggtcctgccatgtcagcacagcgtctgc
ctgatgtgtgcctcagaggtcctggttcaaaatggctaccctcctccggagctgccaccc
gagcccaactctcctgcctccacccccaacacccgctctccccgccaggcacgcaggccc
atgcccagcaaggccgaccatcgacccatcgaccgcgtgctacgttcaggatttgggacg
tatccgtcgccggggcgacggcgtaaggaaccgccgccccctgcgatgttgtttccgtgc
ccgccctgtgggagagaggtagagctgggagagaagggcctgactgactgcctgcgtaac
ctcaccttggagcgcattgtagagaggtacaggcacacagtgagcctgggcagtgtggct
gtgatgtgtcagttctgcaagcctccccagtccctggaggccactaagggctgcgccgac
tgccaagccagcttctgtaacgagtgtttcaagctctaccacccctgggggacgccgcgy
gcccagcacgaacacgtccagcccaccctcaacttcaggcccaaggttctgtcgtgtccg
gagcatgaccaggagcgtctgcacttctactgtaggacgtgccagcggttgctrtgcccg
ctctgcaagctgcgccgcgtccaygccgggcacaaggtggcgccagtcgcccaggcctac
cagaccctcaaggacaagattaccaaggagatgaactacattctgtccaaccaggagacg
gtgctgggccagatctcacagctggagagtgccaccactcagacagaggcgaacagcgta
gcggcacgggagcagctgtctcagagcgtgagagacctgaccgcccttctcgctgagcgc
cacgcctcattgtctcaggccctggagggggcacggcagaggcggggcgaggcgttggcg
ggccaggtggcggagaggcggagcctgctagaacacgcaggtctcatggcgttctcccaa
gagctgctgaaggagacggacccgccctgcttcgtccaggcagcgcgccagacacacagc
aggttatccacgtccatcgaggggctgcagtgtttctctctggccgctgatccctccttc
agacacttccagctggacgtctccaaagagctcaaactcctcacagacctgcagttcatc
caggcccctctggcccctgttattgacacccaaaagaccctggcctatgaccagctcttc
ctgtgttggcggctgcctcaggaatccgcccccgcctggcacttctctgtggagtttcgt
cgccggggggtggtgccaggaggcggggccaggggtggtatccaagggcgattggctgcg
gcccgctggggctggcagcggctggaggaggtgggcggaaccagtgctgtgattgacagg
ttggagatggacagtgtgtatgtgttgagggtgagaggctgcaacaaggcgggcttcggg
gagtacagtgaggaggtgtacctacacaccccgccagcaccggtgttaaatttctacctg
gactctcgctggggtctccatgccgaccggctggtggtgagtaaggaacagcgctgtgcc
cggagcgtccccggcctgtccctgatgcaggccgctgaccgagcgctcacttcctgtcac
ctgactgcagacctcctggtgggcgacgtggccatcacccagggcaggcactactgggcg
tgctcagtggagcccggctcctatctggtcaaagtgggggtgggcctagaggccaaacta
caggattggtttcacctcccgcaagacatggccagtccccgttatgacccagacagtggc
catgacagtggggcagaggattccctggaatcccctccccccttctctttcctcaccatg
ggcatgggcaagatcttcctgccccaggctcccaaccatcataacaaccatggttgcaat
ggcaccaacccccgccgcagccccaccatcgccaacggcaacagccctgcctcctcgcct
acgggcctcacctaccccctgcctcccaggcttggggtgtgccttgactttgagaagggt
cgcgtcactttctacgatgcccactcgctccgtcctctgtgggaggggcctgtcgattgc
tccggccccgtttgcccggctttcttttttattggcggaggggcactacagttacaggag
ttggtggccaatcggatggcagaccagactccagtcaggagggtcaccatccaatcacgt
gtcactaatctgaataactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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