KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111960692
Entry
111960692         CDS       T05762                                 
Name
(RefSeq) peroxisome assembly factor 2
  KO
K13339  peroxin-6
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:salp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    111960692
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:salp04131]
    111960692
Membrane trafficking [BR:salp04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    111960692
SSDB
Motif
Pfam: AAA AAA_lid_3 AAA_16 AAA_22 AAA_33 ABC_tran AAA_5 DUF815 RuvB_N AAA_19 nSTAND3 RNA_helicase TIP49 AAA_18 TsaE Mg_chelatase AAA_7 Vps4_C AAA_28 AAA_24 AAA_14 AAA_25 AAA_2 IstB_IS21 AAA_17 Parvo_NS1 Wza_C
Other DBs
NCBI-GeneID: 111960692
NCBI-ProteinID: XP_023838617
Position
LG1:complement(9579733..9594308)
AA seq 1089 aa
MAAQVELSCLDTFPTHLNPLHVLVIKSQFRYAFPSCNEPTSTLLFTSRKLQTLGKTAVLL
CAHSTEETSGCGADGNDTTLKLYTSKIFLKHYGLQDDIRGVVRPLSPFSLGKVVIGARTR
QSFKWANSDKFSNGLLILASCQGQPLLARQGDSLSLPYHPLLGDDISQVQHSLFDLVVLE
CTPLTQGMITINTTVVVTDCRDIAQHGALETSNPLATRNLTSLFVSDFAHYANSLGGGSS
LLDNRQVLDSSLSVFLQALECRLDVRIVDIRRLYGQGRIVLVEKRDAKIDFDSTVFVSKQ
LLLKLGLFNREWVVVSRFNCSSEMTKTSYRGESLPSPGQADDDAPGKEPSKGTEMVHLGS
VVVADFSKCAELDLHDNVGFISPTHWFNLSNGEPVPVSSRAVKIKRWNRVVSQSGLQLSE
SLSRSASPLLAKELHIDAVISPEYSSHGPFDSILCEHFTIPRLVQLGGVLGIPSEGHPEV
LESNSEGITRWPVVYFKVKKVCGSTEEEDQGPYLADTVHTSLYMGGSTNSLAPCSLVGEE
PSLWTSLSPPGLSSTVDQFSTIIQPHMNESSAALMSGCTILLLGPSGSGKFTSVRAVCRR
LHLHLVKVDCVTLCADTAAACEAKMKSVFQRAEAHRPCILLLRNLQLLGQPRDGTEEDAR
VIDALCQFIAHSPASVVVVAAVSKPRELSSDVMAAFIHQVSIESPSEEQRRAMLASLSEG
MPLGRDVNLARLAKNTAGFLLGDLSALLTQAGKSAHGRILQSCFPEGGSVQEEEDLCACG
VTILAQDFTNALETLQDAHSQAIGAPKIPSVRWQDIGGLQQVKREILDTVQLPLERPELL
SLGLRRAGLLLYGPPGTGKTLLAKAVATECSMTFLSVKGPELINMYVGQSEENVREVFSK
ARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRP
DLLDQSLLRPGRFDKLVYVGINEDKESQLQVLKAIVRKFKVDPSVSLQDVVERCPPQLTG
ADIYALCSDAMMSAIKRKIARVTDGLDTEDTPLILSAEDFNQALDCLKPSVSEQELLKYK
LIQQKLTAK
NT seq 3270 nt   +upstreamnt  +downstreamnt
atggcagctcaggtagaactgtcatgtttagatacatttccaacccacttaaatcctttg
cacgtgcttgttatcaagtcacaatttagatatgcgtttccaagttgcaatgagcctact
tcgacccttttattcacatcacggaagcttcaaacactcgggaaaactgccgttttgctc
tgcgcgcactcaacagaggagacgtcaggttgtggggcggatggaaacgacacaacttta
aaactgtacacaagtaagatctttctcaaacactatggtctccaggatgatataagggga
gttgtacgcccactgtcaccgttttcccttggaaaagttgttataggggcacgaacaaga
cagagtttcaagtgggcaaactcggataagttttccaatggacttctcatactggcttcg
tgccaaggtcaacccctattggcacgacaaggggactcgctatcacttccctatcaccct
ttacttggagatgatatatctcaagtgcaacactctctgttcgatttagttgtgttggag
tgtacacctctaacgcaggggatgataacaatcaacacaacagtggtggtcaccgactgc
agagacattgcgcaacatggtgcactggagacgtcgaatcctttggctactagaaatttg
acctcgctatttgtctctgattttgcacactacgcgaatagtcttggcgggggaagctct
ttacttgacaacaggcaagtattggactcgagtttatccgtttttttgcaagcactggag
tgtaggctggatgtcagaatcgtggatattcgtcgcttgtacggtcaagggagaattgta
ctagtggagaagcgcgatgctaaaatcgattttgacagtactgttttcgtaagcaaacag
ttgctgctcaaactcgggttattcaaccgtgagtgggtagtggtgtctaggtttaactgc
tcatcagaaatgacaaagacgtcctacagaggcgaatccctgccaagtcccgggcaagcc
gatgatgacgcacctggcaaagagccatctaagggcaccgaaatggtccatctcggctcg
gttgttgtggcagatttcagcaagtgtgcagagttggaccttcatgacaacgttggcttc
atatcgccgactcattggttcaacttgtcaaacggagagccagtgccagtcagtagcaga
gctgtgaagataaagagatggaaccgggtcgtttctcagtcaggtcttcagctttctgag
agcctctctcgatcagcatcaccgctgttagccaaagaactccatattgatgctgtcatc
tccccagaatacagttctcatggtccctttgacagtatcctctgtgagcactttaccata
ccaagacttgtgcagctgggcggtgttttgggcatcccatctgaagggcatcctgaagtc
ttggagagcaactctgagggaatcacaaggtggccggttgtgtatttcaaagtgaaaaag
gtttgtggctctacagaggaggaagaccaaggtccttaccttgcagacaccgtccacaca
tctctatacatgggcggctccaccaatagcctggctccctgttctcttgttggtgaggag
ccttccctctggactagcctgtctccccctgggctctccagcaccgtggaccaattctcc
actatcatccagccccacatgaatgaaagctctgctgctctgatgagtggctgcaccatc
ctcctcctgggaccgagtggcagtggcaaattcacctctgtcagagctgtatgccgtaga
ctccatctgcacttagtgaaggtggactgcgtgaccctctgcgccgacacggccgccgcc
tgcgaggcgaagatgaagtctgtcttccagcgagctgaggcccaccggccgtgcattctg
ctgctcaggaacctgcagctgctgggccagcccagggatggcaccgaggaggatgccagg
gtcatagacgccctgtgccagttcattgcccactcccctgccagcgtggtcgtggtggca
gcggtgagtaaaccccgggagctgtcgtctgatgtgatggcagcctttatccaccaggtg
tcgatagagagccccagtgaggagcagcgccgggccatgctggccagcctcagcgagggc
atgcccctggggagggacgtcaacctggccaggctggccaagaacactgcgggctttcta
ttgggggacctcagtgcactgctgactcaggctggtaaatcagcccacggaaggatactg
caatcctgtttcccagaggggggcagtgtgcaggaggaagaggacctctgtgcctgtggg
gtaaccatcctggcccaggacttcaccaatgccttggagaccctccaagacgcccactct
caggccatcggagccccgaagatccccagtgtgcgctggcaggacattggcggcctgcag
caggtgaagcgggagatcctggacacggtgcagctgcccctggagaggcccgagctgctg
tccctgggcctgcgccgcgccggcttgctcctctacgggcctcccggcacgggcaagacc
ctgctggccaaggctgtggctaccgagtgctccatgaccttcctcagtgtcaaaggcccg
gaactcattaacatgtacgtgggtcaaagcgaggagaacgtgagagaggtgttctccaaa
gctcgagcggcggccccttgtatcatcttctttgacgagctggactctctagcgcccaac
agagggcgcagtggagactctggtggagtcatggacagggtggtctctcagctcctggct
gagcttgacggacttcactcctctggggacgtgtttgtgattggagccaccaaccggcca
gacctgctcgatcaatcactgctcagacctggcaggtttgacaaattggtgtatgttggg
atcaatgaagacaaagagtctcagctgcaagttctgaaggccatagtcagaaagttcaag
gtggaccccagcgtcagtctccaggatgtagtggaacgctgccctcctcagctcacaggg
gcggacatatatgctctctgctccgacgccatgatgtctgccattaagaggaagattgca
cgtgtcaccgatggtctggacaccgaggatactcctctcatactctctgccgaagacttt
aaccaagcattggattgcctcaaaccgtccgtctctgaacaagagctgctcaaatataaa
ctcattcagcagaaactcactgcaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (27)   
   Pfam (27)   
All databases (36)   

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