KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111961691
Entry
111961691         CDS       T05762                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111961691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111961691
   03041 Spliceosome [BR:salp03041]
    111961691
   03032 DNA replication proteins [BR:salp03032]
    111961691
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     111961691
Spliceosome [BR:salp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    111961691
  U2 snRNP components
    111961691
 Complex B
  U1 snRNP components
    111961691
  U4/U6.U5 tri-snRNP components
    111961691
 Complex C
  U2 snRNP components
    111961691
DNA replication proteins [BR:salp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     111961691
SSDB
Motif
Pfam: LSM ATP-grasp_2 Kringle TSP9
Other DBs
NCBI-GeneID: 111961691
NCBI-ProteinID: XP_023839915
Position
LG4q.1:29:23527432..23531469
AA seq 128 aa
MSIGVPIKILHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTHRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGTGAGRGKAAILKAQVAARGRGRGGGIGR
GTIFQKRR
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtccatcggcgtgcccatcaagattctgcatgaagcagagggtcacattgtgacctgt
gagaccaacactggtgaagtgtacagaggcaagctcattgaggctgaggacaacatgaac
tgccagatgtccaatatcactgtgactcatcgggatggccgtgtagcccaactagagcag
gtctacatccggggcagcaagattcgcttcctgattttaccggacatgttaaagaatgct
cctatgttaaagagcatgaaaaacaagaaccagggcaccggagcaggaagggggaaggca
gccattctcaaagcccaggttgctgcaagaggacggggtcgtggcggaggaattggaaga
ggaaccattttccagaagaggcgatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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