KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111963774
Entry
111963774         CDS       T05762                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082  ATP-dependent chromatin remodeling
salp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111963774
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111963774
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:salp01009]
    111963774
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salp03021]
    111963774
   03036 Chromosome and associated proteins [BR:salp03036]
    111963774
Protein phosphatases and associated proteins [BR:salp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     111963774
Transcription machinery [BR:salp03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     111963774
    SWI/SNF complex
     111963774
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    111963774
   PBAF complex
    111963774
   SWI/SNF complex
    111963774
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 111963774
NCBI-ProteinID: XP_023843044
Position
LG5:1509490..1527507
AA seq 370 aa
MALSKTFGQKPIKLQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERKKI
VASSHATSVTLLKASECEEIFEGNDEKYKAVSISTELPAYLREQKAKRSSQWVPTLPNSS
HHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQAEVLVPIRLDMEIDGQK
LRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILDEQTD
QRVIIKLNIHVGNISLVDQFEWDMSERENSPETFALMLCSELGLGGEFVTTIAYSIRGQL
SWHQRTYAFRADFSENPLPTVEIAIRHTGDADTWCPLLETLTDAEMEKKIRDQDRNTRRM
RRLANTAPAW
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggcgttaagcaaaacctttggccagaagccgattaaattgcagctagagcaagatgga
gacttctacatggttggatcagaggttggaaactacctccgtatgttcaggggctctctg
tataaaaggtacccatcactctggaggaggttagcctcagtagaggaaaggaagaagatt
gtagcatcatcacacgccacaagtgtgactctgctgaaggcgtccgaatgtgaagagatc
tttgaggggaatgatgagaagtacaaagcggtttccataagcacagagctaccagcgtac
ctcagggagcagaaggcgaagaggagcagccagtgggtccccacgctgcccaatagctcc
caccacctggatgctgtgccctgctccaccaccatcaatcgcaaccgaatgggccgcgac
aagaagaggaccttccccctgtgctttgacgaccacgacccggcggtgatccacgagaat
gcgtctcaggccgaggtgttggttcccattcgtctggacatggagattgacgggcagaag
cttcgagatgccttcacctggaacatgaatgagaagctgatgactccggagatgtttgct
gagatcctgtgtgacgacctggacctgaaccccctggcctttgtcccggccatcgcctca
gctatccgccagcagatagagtcctaccccacagacagcatcctggatgaacagaccgac
cagagggtcatcatcaagctgaacatccacgttgggaacatctccctggtggaccagttt
gagtgggacatgtcggagagggagaactctccggagacgtttgccctgatgctgtgctcc
gagctgggcctgggaggagagtttgttactaccattgcctacagcatccgcggccagctc
agctggcaccagaggacgtacgccttcagggctgatttcagtgagaaccccctgccaacg
gtggagattgccatccgccacacaggcgacgctgacacatggtgccctctgctggagacc
ctgacagacgcagagatggagaagaagatcagggaccaggacaggaacaccaggcgcatg
agacgacttgccaacactgcccccgcctggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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