KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111972988
Entry
111972988         CDS       T05762                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111972988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:salp03041]
    111972988
Spliceosome [BR:salp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111972988
 Complex B
    111972988
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 111972988
NCBI-ProteinID: XP_023855870
Position
LG14:36162256..36179352
AA seq 1014 aa
MADRTPGGTQKANAKALLESKLKSFSIGKMAVSKRTLSKKEQEDIKKKEDELAAAEIYEE
FLAAFEGGEGKVKAFVRGGIANATKEEAASDDKKGKLYKPKSRFETAAAPKSSFLPLETP
PQFLTLDKRHTLKKTNEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRFEPLSGMEG
KRSSLDGSSRRNRPSSVLDDAAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNAKMIMNFEMKLGWGKGVPIPP
HPIYIPPSMVEHTLPPPPSGLPFNAQPCERLTNPNAALLPPPKNKEEFHKTLSQAIVKVV
IPTERNLLSLIHRMIEFVVREGPMFEAMIMNRELSNPMYRFLFENQSPAHVYYRWKLYSI
LQGEAPTKWRTDDFRMFKNGSLWRPPPLNPYLHGNFEEGEGPEEEEEEPGKKGCLKEEER
DQLEEMLRALTPRKGDIAEAMLFCLLHAEAAEEIVECVTESLSILKTPLPKKIARLYLVS
DVLYNSSAKVANASYYRKYFETKLCQVFSDLNATYKTIQGHLQSENFKQRVMSCFRAWED
WAVYPDPFLIKLQNIFLGLVNLSADKEAPAPITVEKPSVEHLAPGLLAQPEPAEDIDGAP
IGEDMDGASLEDVDGVPIGLDGGTMVDGAPLGSAPLDGALLGMDDLDGVPIKALEEDIDG
VPLDHAAAKAASFKVAPSKWEAVDESELEAQAVTTSKWEIFEQPEEKKDEDDSDDEDTKS
SRSEEPPSYPNPNPIRDDLDSKTKHSEMNEDRRTKLREIEVKVMKFQDELESGKRPKKSG
QSLQEQVENYREKLLQKEKEKEKLEREKEREKKDKEKSEARSKDIKKEKEESTPTRKDRR
GLSPVVARKRRHSGSPGSPPRSSSRRVRSPSPRSERSERLYSKDVGSSRSRSSHKDSPRT
TIIKKSSKRSPSLSRTPKRSRRSRSRTPKKSTKKSRSKSRSPHRSHKKSKKSKH
NT seq 3045 nt   +upstreamnt  +downstreamnt
atggcggacagaacgcctggtggtacgcagaaagccaacgcaaaggcgctgctggagagc
aagttgaagtccttcagcattggaaaaatggccgtgagtaagaggaccctaagcaagaag
gaacaagaggatatcaaaaagaaggaggatgagctggcagctgcagagatctatgaagag
ttcctggctgctttcgagggaggagagggaaaggtcaaggccttcgtccgagggggcatt
gctaatgcaactaaagaggaggctgcttctgatgacaagaagggcaagctgtataaaccc
aagtcacgcttcgaaacagcagcagcaccgaaaagcagcttcctgcctttggaaacccct
ccgcagtttttaacattagataaaagacatacactgaagaaaacaaatgaaaaggaaaag
aagaagagtaatctagagctctttaaggaagaacttaaacaaatacaggaagagcgggat
gaaagacacaagatgaaaggcagagtcagtcgatttgaacctctctccgggatggaggga
aaacgctcctcattggatggttcttcaagaagaaaccgtccgtccagtgttctggatgac
gctgcacctggttcccatgacgtcggagacccctctacaactaacttatatctcggaaac
atcaacccacagatgaacgaggagatgctgtgtcaggagtttgggcgctatggccctctg
gccagcgtgaagatcatgtggccgcggacagatgaagagagggccagggagaggaactgt
ggctttgtggccttcatgaaccggagggatgcggagagagctctgaagaacctcaacgcg
aagatgatcatgaactttgaaatgaagctgggctggggtaaaggcgtgcccatcccccct
caccccatctacatccccccgtctatggtggagcacaccctccccccgccgccctccggc
ctgcccttcaacgcacagccctgcgagaggctgacgaaccccaacgccgccctgctccct
ccgcccaagaacaaggaggaattccacaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgt
gagggcccaatgttcgaagccatgatcatgaatcgagagctcagcaaccccatgtacagg
tttctgtttgagaaccagagcccagcacacgtgtactaccgctggaaactctactccata
ctacagggagaagcaccaacaaaatggcggacggacgacttccgcatgttcaagaacggc
tcgctgtggcgccctcctcccctcaatccctacctgcacggcaactttgaggagggggag
gggcctgaggaggaagaggaggagcctgggaagaaaggctgcttaaaagaagaagagcgt
gatcagctggaggagatgttgagggctctgactcctagaaagggggacatagccgaagcc
atgctgttctgtctcctgcacgccgaggctgctgaggagatcgtagagtgtgtcacagag
tccctctccatcctcaagacaccactccccaagaagattgcacggttatatcttgtctct
gatgtgctgtacaactcatctgctaaagtagccaatgcgtcgtactacagaaaatacttt
gagaccaagctttgccaggtcttctcagacctcaatgcaacgtacaagacgatacagggt
cacctgcagtctgagaactttaagcaacgagtgatgtcgtgtttccgtgcgtgggaggac
tgggccgtgtacccagatcccttcctcatcaagctgcagaacatcttcctgggtctagtc
aacctatcagctgataaggaggctcccgctcccatcacagtagagaaaccatcagttgaa
cacctggcccctggtctactggctcagcctgagccagcagaggacatcgacggggccccc
atcggggaggatatggacggggcctctctggaggatgtggatggggtccctatagggctg
gatggagggaccatggtggacggagcccccctaggctctgccccccttgacggagccctg
ctggggatggatgatctggatggagtgcccatcaaggccctggaggaggacatagacgga
gtgcccttggatcatgctgcggccaaagcagcatcctttaaagtagcaccttcaaaatgg
gaagcagtggatgagtctgagctagaagcacaggccgtgaccacctctaaatgggagatc
tttgagcagccagaggagaagaaggacgaggatgacagtgatgatgaggacaccaagagt
tcccggtcagaagagcctccgagttaccccaaccccaaccccatcagagacgacttggac
tccaagaccaagcactctgagatgaatgaggacagacgcaccaagctccgggaaatagag
gtcaaagtgatgaagttccaggatgagttggagtctgggaaaaggcccaagaagtctggc
cagagtctccaagagcaggtggaaaactacagagagaaactcttacagaaggaaaaagaa
aaggagaaactggaacgagagaaagagagggagaaaaaggacaaggagaaaagcgaagct
cgctctaaagacatcaagaaggagaaggaggagtctactccgaccaggaaagacaggcgt
ggcctgtctcctgtggttgctaggaaacggcgccacagcggctcacccggcagcccccca
cggagcagcagtagacgggtgcgctccccatcccctcgctctgagaggtcagaacgcctc
tactccaaggacgtagggtcatcacgatcccgctcctcccacaaagactcccctcgaacc
accatcatcaagaagtcctctaaaaggtctccctcgttatcccgcacgcccaaacggtcc
cggaggtcacgctccagaacacccaagaaatccaccaaaaaatcccgttcaaaatcacgg
tccccacaccggtcccacaagaaatcaaagaagagtaaacactga

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