KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111974936
Entry
111974936         CDS       T05762                                 
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010  MAPK signaling pathway
salp04137  Mitophagy - animal
salp04141  Protein processing in endoplasmic reticulum
salp04210  Apoptosis
salp04217  Necroptosis
salp04621  NOD-like receptor signaling pathway
salp04622  RIG-I-like receptor signaling pathway
salp04920  Adipocytokine signaling pathway
salp05132  Salmonella infection
salp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111974936
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    111974936
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    111974936
  09143 Cell growth and death
   04210 Apoptosis
    111974936
   04217 Necroptosis
    111974936
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    111974936
   04622 RIG-I-like receptor signaling pathway
    111974936
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    111974936
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111974936
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111974936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111974936
   04121 Ubiquitin system [BR:salp04121]
    111974936
Enzymes [BR:salp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111974936
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     111974936
Ubiquitin system [BR:salp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    111974936
SSDB
Motif
Pfam: TRAF_BIRC3_bd TRAF-mep_MATH zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_6 Sina_ZnF zf-RING_5 ATG16 zf-ACC
Other DBs
NCBI-GeneID: 111974936
NCBI-ProteinID: XP_023858792
Position
LG15:33175123..33186009
AA seq 585 aa
MAAQEPSPPSSLEGNKPGFPKKILANNLEEKHMCNSCLKILRRPLQAQCGHRFCSFCFNK
IVSSGPHKCSACIKEDLFEDPTSILKEGGAFPDNAARREVEALAAVCPNEGCTWTGNIKE
YEVNHEGKCDFMIILCPSCKELMRTNELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRAPCRFHVVGCDMSVEKEKTHDHERACS
YEHLNLLLHFIMGIKVSLESLQPQSLELAGHKIHELHRALRELELKLGQLTLGEGAPVQG
ACAPTLPTLALPALATSFTPLPSAVGAALELQLHSEKTKVAELSRRCQELELKVGTFENI
VCVLNREMERSSTTIEAYNRQHRLDQDKVEILNNKVRQLERTVGLRDLSIVEMEGNIREM
SAATFDGIFVWKISDFTKKRQDAVAGRAPAMFSPAFFTSKYGYKMCLRIYLNGDGTGRAS
HLSLFFVVMRGHSDALLKWPFNQKVKLTPITYVIYPTCNIYCTLNTHYPFEQYFTHDLLN
ALLLVPFLFGVCDTVRSSMLMSVLYLLYLYHNDWNDKGHYVFQGQ
NT seq 1758 nt   +upstreamnt  +downstreamnt
atggctgcacaagagccatcaccaccatcttcactggaaggcaacaaaccagggtttcct
aagaaaattttggcgaacaacctcgaagaaaaacacatgtgtaattcttgtttgaaaatt
ttgagaaggcctctacaagcccaatgtggccatcgtttttgttcattctgtttcaacaaa
attgttagttctggaccacataaatgcagtgcttgcatcaaagaggacttgtttgaggac
cccacatctattcttaaagaaggcggtgcttttcctgacaatgcagcgcggagagaagtc
gaagcattggcagctgtttgtccaaatgaaggatgcacttggacgggcaatatcaaagaa
tatgaggtgaaccacgagggaaagtgtgacttcatgatcattctctgtccctcctgtaaa
gaactcatgagaaccaatgagctggagcgccacaacgaacgagaatgtcctgagaggact
ttaaactgcaaatactgcaaagaacctttccatttcaagaacatcaaggctcacgatgag
atctgtccaaagtaccctatgatttgtgaaggctgcgcaaagaaaaagattcccagagaa
aagtatgtggaccacatcaagttctgcagtaaatttagagcaccttgcagatttcacgtc
gttggctgtgatatgtctgtggagaaggagaagacccatgaccatgagcgtgcatgttcc
tacgaacacttaaatctactcttgcatttcatcatgggcatcaaggtgagcctggagagc
ttgcagccccagagcctggagctcgcaggtcacaagatccacgagctgcaccgggccttg
agagagctggagctgaagctgggacagctgactctgggtgagggagcccccgtgcaggga
gcctgtgcccctaccctccctaccctggccctccctgccctggccacctccttcaccccc
ctgcccagtgcggtgggcgctgccctggagctgcagctccacagtgagaagaccaaggtg
gcagagctgagccggcggtgccaggaactggagctgaaagtgggcaccttcgagaacatt
gtctgcgtcctcaaccgagagatggagcgctcctccaccaccatcgaggcctacaaccgc
cagcatcgcctggaccaggacaaggtggagatcctcaataacaaggtgcgtcagctggag
agaactgtgggcctgagagacctgtccattgtggagatggaggggaatattcgggaaatg
tctgcagctacgtttgatggtatctttgtctggaaaatctcagatttcacaaagaaaaga
caggacgctgttgctggcagagccccagctatgttctccccagcatttttcaccagcaaa
tatggctacaagatgtgcctacggatttatctgaatggggacgggactggacgggccagt
cacttgtctctgttcttcgtggtgatgaggggacacagtgacgccctcctcaagtggccc
ttcaaccagaaggtaaaactcactcctataacatatgttatatatcctacctgcaatata
tactgtacgttaaacactcattacccttttgaacaatatttcactcatgatctcttgaat
gcgttgctgcttgtaccttttttgtttggtgtgtgtgatactgtgagaagcagcatgtta
atgtcagtgttgtatctactgtacctgtatcataatgactggaatgacaaaggtcattat
gtatttcaagggcagtaa

DBGET integrated database retrieval system