KEGG T05762: 111975198

Salvelinus sp. IW2-2015 (Arctic char): 111975198

Entry

111975198         CDS       T05762

Name

(RefSeq) collagen type IV alpha-3-binding protein isoform X1

K08283

collagen type IV alpha-3-binding protein

Organism

salp Salvelinus sp. IW2-2015 (Arctic char)

Brite

KEGG Orthology (KO) [BR:salp00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:salp04990]
    111975198
Domain-containing proteins not elsewhere classified [BR:salp04990]
Pleckstrin homology (PH) domain-containing proteins
  Other PH domain-containing proteins
   111975198

SSDB

Motif

Pfam:

START PH PH_8 PH_11 Acyl_CoA_thio

Other DBs

NCBI-GeneID:

111975198

NCBI-ProteinID:

XP_023859191

Position

LG15:complement(27188358..27224116)

AA seq 622 aa
MSEKSSNSSGSDEDVDPESGHPVELGGVLSKWTNYIHGWQDRWVVLKNNTLSYYKSEDER
EFGCRGSLCLSKAIITPHEFDECRIDISVNDSVWYLRAEDPKHRLRWIDSIELHKVESGY
GSESSLRRHGSMLSLTSAASGFSATSTSSFKKGHSLREKLAEMETFRDILCRQVDTLQKY
FDGCADGVSKDEFQRDRVVEEDEDDFPTSTRPNGDCLHNNNGSKEKLFLPASPKGMNGID
FKGEAITFKATTAGILSTLSHCIELMVKREDSWQKRLDKELEKRRRVEDAYKSALSELKK
KSHYGGPDYEEGPNSLINEDEFFDAVEAALDRQDKIEEQSEKVRIPRLTPVPPGDAYSVI
GTHRFAKQPHSYSSSLSSVELVSASDDVHRFSAQVEDVVQNHMTYSLQDMGGDANWQLVV
EEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHELCHYFWDTDVRNDWETTIENFNVVE
TLSDNAVIVYQTHKRVWPASQRDVLYLSAIRKILATNENDPDTWLVCNFSVDHDNAQPTS
RCIRAKINVAMICQTLVSPPEGNKEISRDNVLCKITYVANVNPGGWAPASVLRAVAKREY
PKFLKRFTGYVQEKTSGKPILF

NT seq 1869 nt +upstreamnt +downstreamnt
atgtcggagaagagttcgaactcgtcgggctccgatgaagatgtggatcccgaatctggg
catcctgttgaactcggtggcgtcctaagcaagtggaccaactacattcacggatggcag
gaccggtgggtagtgttgaagaacaacactctgagctactataagtcagaggatgagcgg
gagttcggctgcaggggctctctgtgtctcagcaaggcgatcatcacaccccatgagttt
gatgagtgtcgtattgacatcagtgtgaacgacagtgtgtggtacctacgggcagaggac
ccaaagcaccggctccgatggattgactccatcgaattacacaaggtggagtcggggtat
ggttcagagtccagtctcaggcgtcatggttccatgctgtctctcacgtccgctgccagt
ggcttctccgccacctccacctcctccttcaagaagggccacagcctgcgggagaagctg
gcggagatggagactttcagagatatcctgtgcagacaggtggacacactacagaagtac
tttgacggctgtgcagacggcgtctccaaggacgagttccagagagacagagtagtggag
gaggatgaagatgactttcccacgagcacgcgtcccaatggtgactgccttcacaacaac
aacggcagcaaagagaagctgtttctccctgccagtcctaagggcatgaatgggatcgat
tttaagggcgaggccatcacgtttaaggccactacagctgggatcctgtctaccctgtcc
cactgcatcgagctcatggtgaagagggaggacagctggcagaagaggctggacaaggag
ctggagaagaggaggagggtggaggatgcctacaagtcggccttgagtgaactgaagaag
aaatctcactacggaggccccgactacgaggagggtcctaacagcctcatcaatgaggat
gagttctttgatgcggtggaagctgccctggacagacaagacaagatagaggaacagtca
gagaaggtgaggatacccagactgacccccgtcccccctggagacgcatactccgtcatc
ggaacacaccgctttgccaaacagccccatagctactcttcctccctgtcctccgttgaa
ttagtcagtgcctcagatgatgttcacagattcagcgcacaggtggaggacgtggttcag
aatcacatgacctactccctgcaggacatgggtggcgatgccaactggcagctggtggtg
gaggagggtgagatgaaggtgtacaggagagaggtggaggagaacggcatcgttctggac
cctctgaaagccacccatgcagtgaagggtgtgaccggacacgagttgtgccactacttc
tgggacacggacgtacgcaatgactgggagaccaccattgaaaactttaacgtggtggag
acactctcagacaatgctgttatagtctaccagacccacaagagagtatggcctgcctct
cagagggacgtcctctacctatcagctatcaggaaaatcctggcgaccaatgagaatgac
ccagacacgtggctggtctgcaacttctctgtagatcacgacaacgcccagcccaccagc
cggtgtatccgtgccaaaatcaacgtggccatgatctgccagaccctggtgagccctcca
gagggcaacaaagagatcagcagggacaacgtcctctgtaagatcacgtatgtggccaac
gtgaaccctggtggctgggcccctgcctcagtcctaagagccgtggccaagagggaatac
cccaagttcctcaaacgcttcaccggttacgtccaggagaagaccagcggaaaacctatc
ctcttctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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