KEGG T05762: 111978229

Salvelinus sp. IW2-2015 (Arctic char): 111978229

Entry

111978229         CDS       T05762

Name

(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1

K05648

ATP-binding cassette, subfamily A (ABC1), member 5

Organism

salp Salvelinus sp. IW2-2015 (Arctic char)

Pathway

salp02010

ABC transporters

Brite

KEGG Orthology (KO) [BR:salp00001]
09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    111978229
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:salp02000]
    111978229
Transporters [BR:salp02000]
ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA5, 6, 8, 9, 10 subgroups
    111978229

SSDB

Motif

Pfam:

ABC_tran ABC2_membrane_3 AAA_21 RsgA_GTPase AAA_29 AAA_23 MMR_HSR1

Other DBs

NCBI-GeneID:

111978229

NCBI-ProteinID:

XP_023863943

Position

LG18:complement(56289386..56388422)

AA seq 1695 aa
MYFIPIAPSCGERPHSCPRQLKHAGSNVSMQPNIIRRDAGVWHQTKSLLYKNLLIKWRTK
QQSLQELILPLLLLCLLILISTLNPHVYYGGISTMELEREDYHLLKGLGYTPINNATNHI
MEEVAQEMHLQDRLEMFSSEEDLENASLYEPSGYVGVVFMGSTPTSYRLRFPYNHLPLPS
DYTESIANCFASSVNCRAANYWYSGFIRLQTLIDAAIIQMQTKRSVWSEMDHLRVVMMGQ
PGSVEVQKFPHALISIYLVLAFTPFITFLIVNVAAEKEHRLKDTMTMMGLYDSAFWLSWG
LLYAALVTTMSILMSIIATYTALFPNSDFIVIFLLIFLYGISSIFFSFMLTPLFKKPKFA
STVGSMLTVVFGCLSLFTVLMKDFPQPLVWVLCLLSPSAFSIGIAQVVYLEAQGGGAVFA
TLANGPHPLYAPLLMLVLDCILYLLLAVYLDQVLPGEFGMRRSLVYFMKPSYWSKRSKRY
VEVSSVYETEVNGAPGVDESVEPVSPEFRGKEAIRINNIRKVYKEKDSIVEALRGLTFDI
YEGQITALLGHSGAGKSTLMNILCGICPPTDGHASIYGSPVAEIAEGAEMRQLVGICPQF
NIIFDVLTVEEHLRIFAAIKGILPSDIDNEVSKVLKDLDLEKIMDAQAKNLSGGQKRKLS
VGIAILGDPKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKA
VISQGQLKCVGSSLYLKTKCGVGYHLRMSIGERCEVDGVTSLVKHHVPKAQLSRQQEAEL
TFTLPFESMDTFSGLFSELDCRPDLGISNYGVSMTTLEDVFLRLEAEAEVDQADYSVFNQ
EQVEDEGDASSLDDTDQRLLTFSDSKPEAVQGHALWRQQFSTVAWLHMLNMQRERKAFVY
TLALFLVFLAAVLVLSLATGNIQIHAPERQFVPIYLLRPNQAPRKYTTSLLVQNSSGSDI
SDFIRNLESQDIKVEMMKNTDYMSCAPHSAAINVTGSNKGFRYSVAFNSTTVHSLPMTVN
VLSNAILRGLNGTQHIQTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTR
DREIKCRSTLRISGLVPSAYWCGQAAVDIPFYYLILTTMTSILFSFHTANLLTSSNVTAV
ILCLIGFGPAMILFAYVVSFMFTRVQSNRDFFSVVSMMVCVVSASIVQLSFVNDNPGLTR
ILHNTLCFFNPLYPLMGCLNSITKATFLPSLYEEDFLWKNLLIAVLSPYLQCILLLFMLR
WLEIRYGGRTMKNDQFCRISSKTKAKVERNPEEGINEDEDVQMEKARVKEALTCQCCEEV
CVCGHYEKPVVVVSNLRKQYKCPREGISLKKRRTVATKNISFCVRKGEVLGLLGPNGAGK
STIMHMLSGDTVPTAGQVLMGDYSTEFRPVDNPLEHIGYCPQVSPLWPRITLEEHLEIYA
AIKGLQGQDVPGIITRVVNALELKGHLHKQAKNLSAGIKRKLCFALSMLGNPQIVLLDEP
SAGMDPKSKQRMWRAIRAAFKNRQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQH
LKGKYGRGYSLEVKLREELTGLQQVALLHKEIRRIFPHAARQESFATLMVYKIPMEDVKS
LAKSFSQLESAKQAFNFEEYNFSQSTLEQVFMEFAKEQENEEEEVGSLSTTFQWQRLRQD
GPVPVNHTDSIVHQL

NT seq 5088 nt +upstreamnt +downstreamnt
atgtatttcatacctatagcgcccagctgtggagaacgtcctcattcatgccccagacag
ttgaagcatgctggtagtaacgttagtatgcagcccaacataatcagaagagatgccgga
gtctggcatcaaacgaaaagcctgctttacaagaatctactcatcaaatggaggactaaa
caacagagtctgcaggagttgatcctgccgctgctgctgctgtgcctgctgattctgatc
agcaccctgaacccacatgtctactacggaggcatcagtaccatggagctggagagggag
gactaccacttactcaagggcctgggatacacccccattaacaatgccaccaatcacatc
atggaggaggtggcccaggaaatgcacttgcaggatcgcctggagatgttctctagtgaa
gaggatctggagaatgccagtctttatgagccctcaggctacgttggggtggtcttcatg
ggtagcacacccacctcttacaggttgcgcttcccttacaaccatctgcccctgcccagc
gactacactgaatctattgccaactgttttgccagctcagtgaactgcagagcagctaat
tactggtactctggcttcatccgcctccagactctcattgacgccgccatcatacagatg
cagaccaagcggtcagtgtggagtgagatggaccacctgcgtgtggtgatgatgggccag
ccagggtcagtggaggtccaaaagttcccccacgctctcatctccatctacctggtgctg
gctttcacacccttcatcaccttcctcatcgtcaacgtggcagcagagaaggaacacaga
ctcaaagacaccatgaccatgatgggcctctacgactctgccttctggctatcgtggggc
ctgctgtatgcagctctggtcaccaccatgtccatcctcatgtccatcatcgctacctat
acagccctcttccccaacagtgacttcatcgtcatcttcctcctcatcttcctctacggc
atctcctctatcttcttctccttcatgctgacccctctgtttaagaagcccaagtttgcc
agtacggtgggctcaatgctgactgtggttttcggctgcctgtccctgttcactgtcctg
atgaaggacttcccccagccgctggtctgggttctttgtctgctgtcccccagcgcattc
tccatcggcattgcccaggtggtgtacctggaggctcaggggggcggagctgtgtttgct
accctggccaacggcccccatcccctctacgccccccttctcatgctcgtcctggactgt
atactctacctgctgctggctgtctacctggaccaggttctaccaggtgagtttggcatg
cggcgctccctggtatacttcatgaagccatcctattggtccaagcgcagtaaacgctac
gtcgaggtgagctctgtgtacgagacagaggtgaacggggccccaggagtggatgagtct
gtcgagcccgtctctccggaattcagggggaaagaggccatccgcattaacaacatccgc
aaggtgtacaaagagaaggacagcatcgtggaagctctgaggggcttgacctttgacatc
tatgaaggtcagatcacagccctcctgggccacagcggagcggggaagtccactctgatg
aacatcctgtgtgggatctgccctccaaccgacggccacgcctccatctatggctcccct
gtggcagagatcgctgagggggcagagatgaggcagctggtgggcatctgccctcagttc
aacatcatctttgacgtgctgactgtagaagagcacctgaggatattcgctgccattaaa
gggattctgccctctgacattgacaatgaggtgtccaaggtgctgaaggatctagacctg
gagaagatcatggacgcccaggctaagaacctgagtggaggccagaagaggaaattgtct
gtgggcatagccatcctgggagaccccaagatcctgctcctggatgaacctactgctggt
atggacccctgttccagacaccaggtgtggtctctgctgaagagtcgcagagcaggcaga
gtcacggtgctcagcacacattacatggacgaggcagacatactcgctgaccgcaaagct
gtgatctctcagggccaacttaagtgtgttggttcttccctatatctcaagaccaagtgt
ggagtaggataccacctcagaatgtctattggtgaacggtgtgaggtggatggtgtcaca
tcattggtcaagcaccacgtccccaaggctcagttgtcacggcaacaagaggctgaactg
acattcaccctccctttcgaaagcatggacaccttttcaggattgttctcagaactagac
tgcaggccagacctgggcatcagcaactacggggtgtccatgacaacgctggaggacgtg
tttcttcgtctggaggctgaggctgaggtggaccaggctgactacagtgtgttcaaccag
gagcaggttgaggatgagggtgatgcatcctctctggacgacactgaccaaagactactg
accttctctgacagcaagccagaggcggtccagggccatgctctgtggagacagcagttc
agcaccgtggcctggctacacatgctcaacatgcagagagagaggaaggcctttgtctac
actctggcattgttcctggtcttcctagctgctgtgctagtattgtctctggctacgggg
aacatccagatccacgctccagaacggcagtttgtccccatctacctgctgagaccgaac
caggccccccggaaatacaccaccagtctactggtccagaactcatcaggctcggatatc
tccgacttcatccgtaacctggaatctcaggacatcaaggtggagatgatgaagaacaca
gactacatgtcctgtgctcctcacagcgcagccatcaacgtcaccggatccaacaagggt
ttcagatacagtgtagcgttcaacagtactaccgtccactctttgcccatgacagtcaac
gtcctcagtaacgccatcctacgaggtctcaacggcacacaacacatccaaacctggacc
aagcccttcgactatcaaattcccgacgccacgtcatatgctctggtctacattgaggct
atcatactggggatgctagctgcaggcatgcctgcctacttcgccatggaccacacccga
gacagagagataaagtgccgttcaacgctgcgtatctctggcctggtcccgtctgcgtac
tggtgtggtcaggctgcagtggacatccccttctactacctcatactgaccaccatgacc
agcatcctcttctccttccatactgccaacctgcttacctctagcaacgtcaccgcagtg
atcctgtgtctgataggttttggtccagctatgatcctgttcgcctacgtggtgtctttc
atgttcacacgcgtccagagtaacagagacttcttctctgtggtctccatgatggtgtgt
gtggtgtctgcctccatcgtccagctgtcatttgtgaacgacaaccccgggctgacgagg
atcctccacaatacactatgtttcttcaaccctctctaccctttaatgggctgccttaac
tctatcaccaaggccaccttcctgccctccctctatgaagaggacttcctctggaagaac
ctgctcattgctgtcctatctccctatctgcagtgcatcctgctgctgttcatgctgcgc
tggttggagatccgctacggagggaggaccatgaagaatgaccagttctgcaggatctct
tccaagactaaggctaaagtggagcgtaacccagaggaggggatcaatgaggatgaagat
gttcagatggaaaaggctcgggtgaaggaggccctcacctgccagtgctgtgaggaggtg
tgtgtgtgtggccattacgagaaaccagtagtggtggtgagtaacttgaggaagcagtat
aaatgtccaagggaaggaatctctctcaagaagaggaggacggtagccaccaagaacatc
tccttctgtgtacgcaaaggtgaggtgcttggactgctggggcccaacggagcagggaaa
agcaccatcatgcatatgttgtctggagacacagtcccaaccgctggacaggtcctgatg
ggggactacagtacagagttccgtccagtagacaaccccctggagcatataggctactgt
ccccaggtcagccctttgtggccccgcatcaccctggaggaacacctggagatctacgct
gccatcaagggcctccagggacaggacgtccctggcatcatcacacgtgtggtgaatgct
ctggagctgaagggccacctccacaagcaggcaaaaaacctctcagctgggatcaagagg
aagttgtgctttgctctcagcatgttggggaaccctcagatagttctgctggacgagcct
tctgcagggatggaccccaagtccaaacaacgcatgtggagggctatccgggcagcgttt
aagaaccgccagcgtggggccattctgacaactcactacatggaggaggctgaggctgtg
tgtgaccgcgtggccatcatggtgtcagggcagctcaggtgtattgggtctatccagcac
ctgaaggggaagtatgggcgtggctacagcctggaagtgaagctgagagaggagctgacg
gggctccaacaagtggcactgctccacaaggagatccgtcgaatcttccctcacgctgca
agacaggagagctttgccaccctgatggtttacaagatccccatggaggatgtcaagtca
ctggccaagtccttctctcagctagagagtgctaagcaagccttcaactttgaagagtac
aacttttcacaatcaaccttagagcaggtcttcatggagtttgctaaggagcaggagaac
gaggaggaagaggtgggttccctcagcaccacgttccagtggcagcggctccgccaggac
ggccctgtgcctgtcaaccacacagacagcattgtgcaccagctctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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