KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111979206
Entry
111979206         CDS       T05762                                 
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510  Focal adhesion
salp04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:salp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111979206
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111979206
SSDB
Motif
Pfam: Laminin_N Laminin_EGF Laminin_B Alanine_zipper Death DNApol_Exo
Other DBs
NCBI-GeneID: 111979206
NCBI-ProteinID: XP_023865354
Position
LG19:23239945..23312314
AA seq 1594 aa
MRWVIQVLFSFTCLAVFSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPHSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKTNRGFIR
TGQDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECAKNNGFGKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLPCNCNGKSAECYFDPELYRATGHGGHCRNCADYT
DGPNCERCLDNYYRHTSGTRCLPCSCNPVGSLATQCDNTGRCSCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGYFNMDPQNPQGCTP
CFCFQHSSVCDSAEGYSIDTVSSTFDRDDEQWTGQQRDSSSVSVQWSAGGEISLISDDYF
PIYFVAPEMFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNAY
PGENMQTFVFRLHDSTDYPWRPTLTHSEFQKLLHNLTSIKIRGTYSERSAGYLDDVKLIT
ARRGPGSPARWVEKCTCPQGYVGQHCERCALGYRRSRPDLGPFSSCDSCNCNGHSDTCNP
DTGMCDCQHNTAGLSCERCKDGYYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTNC
PTGTTGKRCELCDDGFFGDPLGENGQVRVCRACKCSDNIDPNAVGNCDRETGECLKCIYN
TDGFFCDRCKEGFYGNPLATNANDKCKACSCSPYGTVDRQTSCLQVTGQCQCFPHVTNRD
CSACQPGFFNLRSGTGCEQCNCNSIGSTNGQCDIGSGQCECQPGVTGQHCERCEVNFFGF
GLSGCKPCDCDPEGSSTAQCKEDGRCACLPGFVGARCDMCEENYFYNRSTPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSTSETVSDKAFEDRLKEAEKSIMDLLDEAQTSKDV
DKGLLERLGKLNSTLTTQWNRLQNIRNTVDNTGTQADKARNRVRDAESLIGRAREELDKA
KDAISKLDIKAPSISGDPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKALNLL
TKTLDGEGKTNQDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGDKALKIYANLTSLP
PFNTKSLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQTA
DQLLARVDAAKALAEEAAKKGRTTYQEAQHILGNLRDFDKRVNDNKTAAEDAMKRIPEIN
ATIIAANEKTKQAEGALGNAAADAKEAKSKAEEAEKIASAVQKGSAKTKADAEKAFEDTM
MLDGEVNGMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVLN
TINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDHKLAELNDVAKSQEEMITDY
DRQIREIRSDIANLNDIKNTLPDGCFNTPSLERP
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgcgttgggttattcaagttttgttttcatttacttgtttggctgtcttcagccacagt
gctatggatgaatgcactgacgattcgagtcgtcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctccaccagaagaa
tactgcgtacaaaccggggttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcgcagacaacaccacagtgctgtgtacctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcaaactatgttagcgggcatccagtatccacactcaatcaatcta
actcttcatcttggcaaggctttcgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgcacaagtgaggatggaccatggacgccttac
cagtactacagtggctcctgtgagaagacctaccagaagaccaacaggggcttcatccgc
accggacaggacgaacaacaggccctgtgcacagacgagttcagcgacatctcacccctg
actggaggaaacgtcgccttctccacccttgaaggccggcccagtgcttacaactttgac
aacagcccagttcttcaggaytgggtgacagctacagatatcaaagtgaccctgaacagg
ctcaacacattcggagatgaagttttcaatgatcccaaggtcctgaaatcctactactac
gctatctcagactttgcagtgggaggaaggtgcaagtgcaacggccatgcgagtgagtgt
gcgaaaaacaacggtttcggcaaaccggtttgcaactgcaagcacaacacggagggcgat
gactgcaatgtgtgcaagccgttctacaacgaccgtccctggaggagagctacagccaat
aaccctaacgagtgtctgccgtgcaactgtaatggcaagagtgcagagtgctactttgac
cctgagctctaccgtgccactggccacggaggacactgccgcaactgtgccgactacaca
gacgggcccaactgtgagcgctgcctggacaactactacagacacacatctggcacccgc
tgcctgccctgcagctgcaacccagtaggctctctggccactcagtgtgataacacagga
cgctgcagctgtaaaccaggtgtgatgggggacaagtgtgaccgctgccaacctggcttt
cacacgttgaccgaagcaggctgcagaccttgctcctgtaacccttccggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcagctgt
gacaggtgtaagctgggctacttcaacatggacccccagaaccctcagggttgcactccg
tgcttctgcttccagcattcatctgtctgtgacagcgctgaaggctacagcattgacaca
gtctcctccaccttcgaccgagatgatgagcagtggacaggccagcagcgtgacagctcc
agtgtttcagtccagtggtctgctggtggagagatctccctcatctccgatgactacttc
ccaatctactttgtggctccagagatgttcctgggcaatcagctgctgagctatggccag
aatctcaccctgaacttccgggtggacaggagagacacgcgcctctcagccgaggatgtg
gttctggagggggctggtctcagagtggctgtgcctctcattgctcagggaaatgcctat
cctggagagaacatgcagacgtttgtgttcaggctccacgacagcacagactacccctgg
aggcccaccctcactcactcagagttccagaagcttctgcacaatctgacgtccatcaag
atccgtggcacctacagcgagagaagtgctggttaccttgacgatgtgaagctgatcacg
gcgaggagaggtcccgggagcccggctcgctgggtagagaagtgtacctgccctcaaggc
tacgtgggacagcactgtgagaggtgcgccctgggatacaggaggagcagaccagacctg
gggcccttcagttcctgtgactcctgcaactgtaacggacacagtgacacgtgcaacccc
gacacagggatgtgtgactgccaacacaacacagctgggctcagttgtgagaggtgtaaa
gacggttactatggagactccactgtgggcagttccagcgactgcaagccctgcccctgc
cccggaggatccacttgtgctgttgtgcccaagaccaaggaggttgtctgcaccaactgt
cctactggaaccacaggcaagcgctgcgagctgtgtgatgacggtttcttcggagacccc
ctgggggagaacgggcaggtgagggtctgtcgggcctgtaagtgtagcgacaacatcgac
cccaacgctgtgggcaactgtgacagagagaccggggagtgcctcaagtgtatctacaac
acagacggcttcttctgtgaccgctgcaaagagggcttctatggaaaccctctggccacc
aacgccaatgacaagtgcaaagcctgctcctgctctccatatggcacagtggacagacag
accagctgtctacaggtcacaggccagtgccagtgtttcccccacgtcaccaacagggac
tgcagcgcatgtcagcctggcttcttcaacctgcggagcggaacaggctgtgaacaatgc
aactgcaattctattgggtccaccaacggtcagtgtgacatcggttccggtcagtgtgaa
tgccagcccggcgtcaccggtcagcactgtgaacgatgtgaggtcaacttcttcggattc
ggattgtcaggctgcaaaccgtgcgactgtgacccagagggctcctcgacggcccagtgt
aaagaagatggccgctgtgcgtgccttccaggctttgtgggagccaggtgtgacatgtgt
gaggagaactacttctacaaccgctctactcccggctgccagcagtgtccgtcctgttac
tccctcgtcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagactttg
attgacaacctgggctccacatcagagactgtgagtgacaaggcgtttgaggaccgactg
aaggaggcagagaaatccatcatggacctactggacgaggctcagaccagcaaagatgtg
gacaaaggcctgctggaacgcctggggaaactgaacagcacactgaccactcagtggaat
cgtctgcagaacatcaggaacaccgtggacaacaccggaacccaggccgacaaggcccgc
aaccgggtacgagatgctgagagcctgatcggccgcgcccgcgaggaactggacaaggcc
aaggacgccatcagcaaactggacatcaaagcaccctcaatcagtggagatcctaacaac
atgacccttctggcagaggaggctcgcaatctggccgacaaacataaaatggacgcggat
caaattgagaagatcgccaaggatgccaacgacacgtccaccaaggctctcaacctgctg
acaaagactctagatggcgagggcaagaccaaccaagacattgatgagctcaacaggaag
tacaatgaggcaaaggacctggccaagaacctggagaaacaggccaacaaggtgcatgct
gaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgacaagcctgcca
cctttcaacaccaaatcactggaggacgaagcgagcaagatcaagaaggaagcgtctgac
ctggacaagctgattgacaagaccgagaaagagtacaacgacttgagggacgacctgaga
gggaaggagactgaggtccgcaagctgctggagaagggcaagacggagcagcagactgcc
gatcagttgctggctcgtgtcgatgctgccaaggcgctggctgaggaggccgccaagaag
gggaggaccacctaccaggaggcccaacacattctgggaaatctgagagattttgacaag
cgggtgaatgacaacaagacggcagctgaggacgccatgaagagaatcccagagatcaac
gctaccatcatcgcggccaatgagaagaccaagcaggctgagggggcactaggcaacgca
gctgcagacgccaaggaggccaagagcaaggcagaggaggcagaaaagatagccagcgct
gtgcagaagggttctgctaagaccaaggcggatgcagagaaggcctttgaggacactatg
atgctggatggggaggtgaacggcatgatggaccagctgagtgcagccgaggcagagctg
gccaagaagaaagctgaggccgaccaggacatgatgatggctagcatggcatcagacaat
gcgaaggaagcagaggacaacgcccgcaaagccaagagtgctgtcaggaccgttctcaac
accatcaacgacctgctcaagtcactgggcaacattgacaaggtggacctgagcaagttg
ggcttgattgaagggtcactgaagcaggccaaggacaaaatggcgaacagcgacctggac
cacaagctggcggagctgaatgatgtggccaagagccaagaggagatgatcaccgactac
gacaggcagatcagggagatccggtctgacatcgccaacctcaacgacatcaagaacact
ttacctgacggctgcttcaacaccccatccctagagcgaccttaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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