KEGG   Salvelinus sp. IW2-2015 (Arctic char): 112069050
Entry
112069050         CDS       T05762                                 
Name
(RefSeq) low-density lipoprotein receptor-related protein 2-like
  KO
K06233  low density lipoprotein-related protein 2
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:salp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    112069050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:salp04131]
    112069050
Membrane trafficking [BR:salp04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    112069050
SSDB
Motif
Pfam: Ldl_recept_a Ldl_recept_b cEGF FXa_inhibition EGF_CA EGF
Other DBs
NCBI-GeneID: 112069050
NCBI-ProteinID: XP_023992081
Position
Unknown
AA seq 1303 aa
MGPNATYCFVRPRAVAVNPKYGWLYWTDWGDTAYIGRVGMDGTNATALITTKLEWPSALT
IDYTTNKIFFADSHLNFLDFADMDGENRHRAIAGSLPHPFAVTLFEDWVYWTDWNTHTVE
KAHKYTGTGRVVMGNNTHRPNDIHVYHPYRQPRSDNPCATHHLTCSHLCLIGPGGTSATC
ECPDHFIGLSVGFKVQCVADCSSTQFRCGDNEKCVSIWWKCDGQSDCGDGSDEPLTCPPR
YCPIGQFQCQDGNCTYPGFLCDGHADCRDNSDEDAALCSDHRCAENQFQCKNKQCIPVSL
HCDGIIDCSDGSDEDTDGCAQKTCRPGQFTCANGVCIPPNYVCDAQNDCGDGSDEPYEIC
MGPEHNCDELTEFSCKTNYRCIPTWAVCDGSNDCIDNTDEQNCEALTCDPLGDFRCDNHR
CVPIRWKCDGSNDCGDGSDERDCVPRPCSESEYRCDNQQCIPGNWVCDHDNDCGDNSDER
DCELKTCRPGYFQCLSGHCIPGALQCDGRPDCLDISDESSCPTRYPGGRWCPNHQFQCAN
KLCVYENWVCDGNNDCGDHSDEELILCLNITCEMPSRFRCANGYCIYSGNLCNQKDDCGD
GSDEKEDLCREPTLAPCTLQEFKCTNGQCVALPYVCDHNDNCGDLTDEIGCNFGHDRTCE
EKLCQHECTNLNKTGFICSCRPGYRVDPDSTFNCKDINECEVHGTCPQICKNTKGGYDCE
CAPGYRKVGNGNQCEAEGAGPLLLLPENIRIRKFNLQMEAYHDFLEEQEHIMALDYDWDH
NNTGLSMVYFTVEGKDNAAGAIKRAYIPTVDDNSNNIAAAVDLGIKYITTPDGIAVDWVG
RNLYWADSRVKRIEVAMLDGRYRKHLVKTDIDHPSAVAVNPRLGMLYWADRGTAARIEYS
WLDGQHRNVLVPDGLGFPTGLSIDYANGDRVYWSDAKESRIESVLPSGEDRRTALYIDVR
YPFSVSVFEDHIYWSTQEKGEVFRQDKFGRGTKTKLLTAGPWLTQISVYQQQRYNSIGMK
NPCKGICSHLCLLRPGGYTCACPEGTSFVSGSNTDCDAGFDPPPTMPPPCQCINGGTCYF
DDNKAMCICPPEWRGDFCEINIFGVVASSVGIAIGVTVLIVLLLGGLVFAAQRKASVMET
ISHIMPSMPSFRGAPNQSSDPSEEGNDPGPSIKAEPCTAVPMEEAGGKSFENPAYAAEGV
ERPTPNGIATATLVPNATAMENIENPLYAEVRVVAEPDPEPDASATPANTVSVEGAFENP
DAEPVADESLKCEPIPDDNADDSFINPMFSDPTYPSTPADSFI
NT seq 3912 nt   +upstreamnt  +downstreamnt
atggggcctaacgccacctactgctttgtccggccccgtgccgtagccgtcaaccccaaa
tatggctggctgtattggacagactggggggacaccgcctacattggcagggttggtatg
gatggtaccaacgccactgccctcatcaccaccaagctggagtggcccagtgccctgacc
attgactacaccaccaacaagatcttcttcgccgactcccacctcaatttcctagatttt
gctgatatggacggggagaaccgccaccgggccatagcaggctccctgcctcaccccttt
gccgtcaccctgtttgaagactgggtctactggactgactggaacacccacaccgttgag
aaggcccacaagtacactggcaccggccgcgtcgtcatgggcaacaacacacaccggcca
aatgacatccatgtataccatccctacaggcagcctcgcagcgataacccttgcgcaaca
caccacctaacctgtagccacctgtgtctgattggtcctggtgggaccagtgctacgtgt
gagtgtccagaccacttcattggcctctccgtgggcttcaaggtccagtgtgtggccgac
tgttccagcacccagttccgctgcggagacaacgaaaagtgtgtctctatctggtggaag
tgtgatggtcagtccgactgtggtgacgggtccgacgaacccctcacctgcccgccccgc
tactgtccaattggtcagttccagtgccaggatgggaactgcacttatcctggcttcctg
tgtgacggacacgctgactgccgtgacaattcagatgaggacgctgccctctgcagtgac
cacaggtgtgcagaaaatcagttccagtgtaagaacaagcagtgcatccctgtgtcattg
cactgtgacggcatcatcgactgttctgatgggagtgacgaggacactgatggctgtgcc
cagaagacatgccgaccgggccagttcacgtgcgcaaacggagtgtgtatcccgcccaac
tatgtgtgtgatgctcagaacgactgcggagatggatccgatgagccctacgagatctgc
atggggccagaacataactgcgacgagctcacggagttctcctgtaagaccaactaccgc
tgcatccccacctgggccgtgtgcgatggctccaatgactgcatcgacaacaccgacgag
cagaactgcgaggcgttgacctgtgaccccctgggcgacttccgttgtgacaatcaccgc
tgtgtgcccatccgctggaagtgtgacggcagcaacgactgtggtgacggctctgatgag
agggactgcgtgccaaggccgtgctcggagagcgagtatcgctgtgacaaccagcagtgc
atacctggaaactgggtgtgtgaccatgacaacgactgtggggacaactcagacgagcgc
gactgtgagttgaagacatgtcgtccagggtatttccagtgtctgtcgggtcactgtatc
cccggcgctcttcaatgtgacggacgaccagactgcttggacatctctgacgagagctcc
tgtccgacccgttacccagggggccgctggtgtcccaaccaccagttccagtgtgcgaac
aagctgtgtgtgtatgagaactgggtgtgtgacggcaacaacgactgtggagaccactcc
gacgaggagctcatcttatgtttgaacatcacctgtgagatgccatcyaggttccgctgc
gctaacggctactgcatctactctgggaatctgtgtaaccagaaggacgactgtggggac
ggaagtgacgagaaggaggacctctgccgtgagcccaccctggctccttgcaccctccag
gagttcaaatgtaccaatggacagtgtgtagccctgccctatgtgtgtgaccacaatgac
aactgtggggacctcactgacgagataggctgcaattttggccatgaccggacctgtgag
gagaaactgtgtcagcacgagtgtaccaacctgaacaagaccggcttcatctgctcctgt
agacctggatacagagtggacccggacagcaccttcaactgcaaagatatcaacgagtgt
gaggtacatgggacttgcccgcagatctgcaagaacaccaagggcgggtacgactgtgag
tgtgcccccgggtaccgcaaagtgggtaatggcaaccagtgtgaagctgagggtgccggg
cctctcctgttgctcccagagaatatccgtatccggaagttcaacttgcagatggaggcc
taccatgacttcctcgaggagcaggagcacatcatggctctggactatgactgggaccac
aacaacactggactcagtatggtgtatttcacggtggaggggaaggacaatgcggcaggc
gccatcaagcgggcatatatacccacagtggacgacaatagcaacaatatagccgccgct
gtcgacctgggcatcaaatacattaccacgccagatggcatcgctgttgactgggtcgga
aggaacctgtactgggcggactcgagagtcaagagaatagaggtggccatgctggatggg
cgctacaggaagcacctggtcaagacggacattgaccatccctctgctgtggctgtcaat
cctcgactggggatgctgtactgggcggaccgcggaaccgcggccaggattgagtactca
tggttggacgggcagcaccggaatgtcctggtgcccgacggcctgggttttccaacaggc
ctgtcaatcgactacgccaacggtgaccgggtctactggtccgatgccaaggagagtcgc
attgagtcggtgctaccttccggagaagaccgccgcactgcactgtatattgatgtgcgg
taccctttcagtgtgagtgtgtttgaggaccacatttactggagcacgcaagagaaaggg
gaagtgttccggcaggacaagtttggccgtggcaccaagaccaagctgctcaccgctggg
ccctggctcacccagatcagcgtgtaccagcagcagagatacaactcaataggcatgaaa
aacccttgcaaagggatctgtagtcacttgtgtctgctcagacctggaggctacacctgc
gcctgccctgagggaaccagctttgtctctggcagcaacacagactgtgatgcaggattt
gaccccccacccaccatgccccctccatgtcagtgtataaatggcggaacatgctacttt
gatgacaacaaggccatgtgcatatgtcctccagaatggcggggagacttttgcgagata
aatatatttggggtggtcgcgtcttcagtgggtatagccatcggggtgactgtactgata
gttcttctccttgggggtctggtctttgctgcccagaggaaggccagtgtcatggagaca
ataagccacatcatgccaagtatgcctagcttcaggggtgccccaaatcaaagctctgac
ccatctgaggaggggaatgacccgggcccaagcatcaaagcggagccctgtactgctgtt
cctatggaggaggcaggggggaagagttttgagaaccctgcctatgcagctgagggggtt
gagagacctacccctaacggtatcgctactgccacccttgtgcccaatgcgacagcaatg
gagaacattgagaacccgttgtatgctgaggttcgtgtggtagctgagcctgaccctgag
cccgacgctagcgccacacctgctaatactgtatcagtcgagggggcctttgagaatcca
gatgcggaaccagtcgctgacgagtcactaaagtgcgaacccattcctgatgacaatgcc
gacgacagtttcataaacccaatgttctcggatcccacttacccatccaccccagcagac
tccttcatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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