KEGG   Candidatus Syntrophocurvum alkaliphilum: SYNTR_0417
Entry
SYNTR_0417        CDS       T06326                                 
Name
(GenBank) DNA-binding protein HBsu
  KO
K03530  DNA-binding protein HU-beta
Organism
salq  Candidatus Syntrophocurvum alkaliphilum
Brite
KEGG Orthology (KO) [BR:salq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salq03032]
    SYNTR_0417
   03036 Chromosome and associated proteins [BR:salq03036]
    SYNTR_0417
   03400 DNA repair and recombination proteins [BR:salq03400]
    SYNTR_0417
DNA replication proteins [BR:salq03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SYNTR_0417
Chromosome and associated proteins [BR:salq03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SYNTR_0417
DNA repair and recombination proteins [BR:salq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SYNTR_0417
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg HU-CCDC81_euk_1 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: QGT99010
UniProt: A0A6I6DD24
Position
405454..405774
AA seq 106 aa
MNKSELVKSLAEKAEITQKDATKALDAMVETIQQALADGDKVQIIGFGSFEVRDRKERKV
ISPATGEEIVVPATKVPAFKPGKSLKEAVSVTEEKKAAPKRKAKKK
NT seq 321 nt   +upstreamnt  +downstreamnt
gtgaacaaatctgagctagttaaatctttagctgaaaaagcagaaattacccagaaggat
gctacgaaagcattagatgcaatggtagaaactatccaacaagctttagccgatggggat
aaggtgcaaattattggctttggcagttttgaggtgcgtgaccgtaaggaaagaaaggtc
attagtccagcaacaggtgaagaaatcgtagtgccagcaactaaagtacctgcgtttaaa
cctgggaaatctcttaaagaagctgtttcagttacagaagaaaagaaagcagctccaaaa
agaaaagcaaagaaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system