KEGG T06326: SYNTR

Candidatus Syntrophocurvum alkaliphilum: SYNTR_2010

Entry

SYNTR_2010        CDS       T06326

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

salq Candidatus Syntrophocurvum alkaliphilum

Brite

KEGG Orthology (KO) [BR:salq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salq03032]
    SYNTR_2010
   03400 DNA repair and recombination proteins [BR:salq03400]
    SYNTR_2010
Enzymes [BR:salq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SYNTR_2010
DNA replication proteins [BR:salq03032]
Prokaryotic type
  DNA Topoisomerases
   SYNTR_2010
DNA repair and recombination proteins [BR:salq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SYNTR_2010

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C HATPase_c_3 GyrB_hook

Other DBs

NCBI-ProteinID:

QGU00604

UniProt:

A0A6I6DI76

Position

complement(2069929..2071836)

AA seq 635 aa
MARFENNYNASNIQVLEGLEAVRKRPGMYIGSTGSKGLHHLVFEIVDNSIDEAVAGYCDA
IEITIHEDNSVTVCDNGRGIPTDIHPIIGVPAIEVILTTLHSGAKFGGSGYTISGGLHGV
GLSVVNALSRKMDVLIKRDGYIYKQRYEKGKPVTKITKNGDTKETGTSIHFYPDPEIFED
ITFDSEIIIQRLRELSFLNKGIKIIFTDLRTEEPLKKEFLYTDGLKDFVLYINKNKESIN
NKPIYFENKRDEVVVEVAIQYNSGFSENLYSFANNIKTHEGGTHEVGFKNGLTRIINDYA
KKNGLLKENDGNLSGEDIREGIVAIISVLVKEPQFEGQTKTKLGNTYVRGIVESTIYDYM
EDFLNENPNVSKKIVDKAISARRAREAAKKARELTRRKSALESIALPGKLADCSNRDPSQ
TELFIVEGDSAGGSAKQGRDRNNQAILPLRGKILNVEKARLDKVLSNEEIKSLITAIGSG
IDEDFDIKKSRYHKLIIMTDADVDGSHIRVLLLTFFYRYMRQLIEYGYVYIAQPPLYGLK
RGKEINYFYDEESMNNYLKESEKKWSIQRYKGLGEMDPEQLWETTMNPESRTILQVTIED
AIRADGVFSSLMGDNVEPRREFIQENAKYVTNLDI

NT seq 1908 nt +upstreamnt +downstreamnt
ttggccagatttgaaaacaactataatgcgtctaatatacaagtattagaaggcttagaa
gcagttagaaaaagaccaggtatgtatataggctcaactggatctaaaggtcttcaccac
ttagtttttgaaattgtagataatagtatagacgaagcagttgctggttattgtgatgct
atagaaattacaattcatgaagataatagtgtaactgtttgtgataatggtagaggtata
ccaacagatattcatcctataataggagtaccggctatagaggttattttaacaaccctt
cattcaggagctaaattcggaggtagtggttatactatatccggtgggctacatggtgta
ggtctttctgttgttaacgcattatcaagaaaaatggatgtattaataaaaagagatggg
tatatatacaaacaaagatatgaaaaaggaaaaccagtaactaaaataacaaaaaacgga
gatacaaaagaaacagggacaagcattcatttttatccagaccctgaaatatttgaagat
attacatttgatagtgaaataattattcaaagattaagagaattatcctttttaaataaa
ggcataaaaattatttttactgatttaagaacagaagaaccactaaaaaaagaattctta
tatacagatggactaaaagactttgttttatatatcaataaaaacaaagaatcaattaac
aataaacctatatattttgaaaacaaaagagatgaagttgttgtagaagtagcaattcag
tacaattctggttttagtgaaaacctttattcctttgctaataatataaaaacacatgaa
ggtggtacacacgaagtaggtttcaaaaatggacttacccgaataatcaatgattatgct
aagaaaaatggtttactaaaagaaaacgatggcaacctttctggagaagatataagagaa
ggaatagtagcaattatctcagttttagtaaaagagccacaatttgaaggtcaaacaaaa
acaaagttaggtaatacatatgttagaggtatagtagaaagtacgatttatgactatatg
gaagattttttaaatgaaaatcctaatgtttccaaaaagatagtagacaaagccatatct
gctagaagagcaagagaagcagccaaaaaagctagagaattaaccagaagaaaaagtgca
ctagaatcaattgccttaccaggtaaattagctgattgtagtaaccgagatccttcacaa
acagaattatttattgtagagggagattctgctggtggttcagctaagcaaggtagagat
agaaacaaccaagcaatacttcctctaagaggaaaaatattaaatgtagaaaaagcaaga
ttagataaagttttatctaatgaagaaataaaatcattaattacagctattggctctggt
atagacgaagatttcgatataaaaaaatctcgttatcataaacttataatcatgactgat
gctgatgttgatggttcacatattcgagttttattactaactttcttttatcgctatatg
cgtcagcttatagaatatggttatgtttatatagcacaaccacctctttatggcttaaaa
agaggtaaagaaattaactatttttatgatgaagaatcaatgaataattatttaaaagaa
tcagaaaaaaagtggtcaatacaaagatacaaaggcctaggtgaaatggacccagaacaa
ctatgggaaactacaatgaatccagaaagcaggacaattttgcaggttactatagaagat
gcaattagagcagacggagttttttcaagcttaatgggggataatgttgaaccaagaaga
gaatttatacaagaaaatgcaaaatatgttaccaatttagatatataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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