KEGG   Streptomyces albus: SLNWT_4566
Entry
SLNWT_4566        CDS       T03823                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
sals  Streptomyces albus
Pathway
sals03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sals00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SLNWT_4566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sals03021]
    SLNWT_4566
   03400 DNA repair and recombination proteins [BR:sals03400]
    SLNWT_4566
Enzymes [BR:sals01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SLNWT_4566
Transcription machinery [BR:sals03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SLNWT_4566
DNA repair and recombination proteins [BR:sals03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SLNWT_4566
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 TarH
Other DBs
NCBI-ProteinID: AJE84942
UniProt: A0A0B5F3S4
Position
5358686..5362597
AA seq 1303 aa
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQIEQRRDSDLETRAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGAERELKGE
ERPFASVAEAIMAFDAGELSLQSKIDVRFPVGTIPPRGWTPAAPAEGEDFGPDEWQQGDT
FRLRTTLGRALFNELLPEDYPFVDYEVGKKQLSQIVNDLAERYPKVIVAATLDNLKAAGF
YWATRSGVTVAISDVVVPEAKKEIVKGYEAQDEKVQKQYERGLITKDERTQELIALWTKA
TNEVAEVMNDNFPRTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFR
EGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLAI
AERGADGVLRKTEDVETSVYARMLAEDIVVDGKVLAPANVDLGDVLIDQLVAAGIETVKT
RSILTCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAG
DDITQGLPRVVELFEARTPKGVAPISESAGRVRIEETEKTKKIVVTPDDGSDETAFPISK
RARLLVGEGDHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKH
IEIIIRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVQEGGHPASGRPQLMGITKA
SLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVE
PTEEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq 3912 nt   +upstreamnt  +downstreamnt
gtgctcgacgtcaacttcttcgacgagctgcggatcggcctggcgaccgcggacgacatc
cgacagtggtcccacggcgaggtcaagaagccggagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcacccgcgccaaggtgcgccgtgagcggatgggccacatcgagctcgccgccccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctcgggtacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcacgttcgtcgac
gaggagcgccgcacccgcgacctgccctccctggaggcgcacgtctccgtggagcgccag
cagatcgagcagcgccgcgactccgacctggagacccgcgccaagaagctcgagacggac
ctcgccgagctggaggccgagggcgccaaggccgatgtgcgccgcaaggtgcgcgagggc
gccgagcgcgagatgaagcagctgcgcgaccgcgcgcagcgcgagatcgaccgtctcgac
gaggtgtggaaccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacctacttcgacggctcgatgggcgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gccttcctgcagacgtccaacagccccaagggcatggtgctcgactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgcagggtcatcaaccgcaacaaccgcctgaagcgcctgctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctccaggaggcggtcgacgcc
ctcttcgacaacggccgccgcggccgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccggcagaacctgctcggcaag
cgggtcgactactcggcgcgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggccatggccctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgcggccgc
acggtcgtctacgacgtgctcgaagaggtcatcgccgagcacccggtgctgctgaaccgc
gcgcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgccttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtcccgtcaccatgcccacccaggac
atggtgctcggactgttcttcctcaccaccgacggtgcggagcgcgagctgaagggcgag
gagcgtccgttcgcctccgtcgccgaggccatcatggccttcgacgccggcgagctgtcc
ctccagtcgaagatcgacgtccgcttccccgtgggcaccatcccgccgcgcggctggacg
cccgcggcgcccgccgagggcgaggacttcggtcccgacgagtggcagcagggcgacacc
ttccggctgcggaccaccctgggccgcgcgctcttcaacgagctgctgcccgaggactac
cccttcgtcgactacgaggtcggcaagaagcagctctcccagatcgtcaacgacctggcc
gagcgctacccgaaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttc
tactgggcgacccgctccggcgtcaccgtcgccatctccgacgtcgtcgtccccgaggcg
aagaaggagatcgtcaagggctacgaggcccaggacgagaaggtccagaagcagtacgag
cgcggtctgatcaccaaggacgagcgcacccaggagctcatcgccctgtggaccaaggcg
accaacgaggtcgcggaggtcatgaacgacaacttcccgcgcaccaacccgatcttcatg
atggtgaactcgggcgcgcgcggaaacatgatgcagatgcgtcagatcgccggtatgcgc
ggtctggtgtcgaacgccaagaacgagaccatcccgcgtcccatcaaggcgtccttccgt
gaaggcctctccgtcctcgagtacttcatctcgacgcacggtgcccgtaagggtctggcc
gacaccgccctgcgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtctcc
caggacgtgatcatccgcgaggaggactgcggcaccgaccgcggcctcaagctggcgatc
gccgagcggggcgccgacggggtgctgcgcaagaccgaggacgtcgagacctccgtgtac
gcgcggatgctcgccgaggacatcgtcgtggacgggaaggtgctggccccggccaacgtc
gacctgggcgacgtcctcatcgaccagctggtcgccgcgggcatcgagacggtcaagacc
cgctcgatcctgacctgcgagtccgccgtcggcacctgcgccatgtgctacggccgctcg
ctggccaccggcaagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtcc
atcggtgagcccggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggt
gacgacatcacccagggtctgccccgagtcgtcgagctcttcgaagcccgtacgccgaag
ggtgtcgccccgatctccgagtccgcgggccgcgtccgcatcgaggagaccgagaagacc
aagaagatcgtcgtcaccccggacgacggcagcgacgagacggccttcccgatctccaag
cgcgcccgtctcctggtgggcgagggcgaccacgtcgaggtgggccagaagctcaccgtg
ggtgccaccaacccgcacgacgtgctccgcatcctcggccagcgcgccgtccaggtccac
ctggtcggcgaggtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcac
atcgagatcatcatccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgcg
gaactcctgccgggcgagctcgtcgagcgctccaagttcgagaccgagaaccgtcgtgtg
gtccaggaaggcggccacccggcctccggccgtccgcagctgatgggtatcaccaaggcc
tcgctggcgacggagtcctggctgtcggccgcctccttccaggagacgaccagggtcctg
acggacgcggcgatcaacgccaagtccgacagcctcatcggcctcaaggagaacgtcatc
atcggtaagctcatcccggccggtacgggcctgtcccgctaccgcaacatccgggtcgag
cccaccgaggaagccaaggccgcgatgtactcggccgtcggctacgacgacatcgactac
tcgcccttcgggacgggttcgggccaggcggtcccgctggaggactacgactacggtccg
tacaaccagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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