KEGG   Salegentibacter sp. T436: AO058_02480
Entry
AO058_02480       CDS       T04614                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
salt  Salegentibacter sp. T436
Pathway
salt03030  DNA replication
salt03410  Base excision repair
salt03420  Nucleotide excision repair
salt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:salt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AO058_02480
   03410 Base excision repair
    AO058_02480
   03420 Nucleotide excision repair
    AO058_02480
   03440 Homologous recombination
    AO058_02480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salt03032]
    AO058_02480
   03400 DNA repair and recombination proteins [BR:salt03400]
    AO058_02480
Enzymes [BR:salt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AO058_02480
DNA replication proteins [BR:salt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AO058_02480
DNA repair and recombination proteins [BR:salt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AO058_02480
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AO058_02480
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2 HHH_5 Globin HHH IMS_HHH RecR_HhH
Other DBs
NCBI-ProteinID: APS37814
UniProt: A0A1L6QZU4
Position
585816..588647
AA seq 943 aa
MSAQKRLFLLDAYALIFRGYYAFIKNPRINSKGFDTSAIMGFMNSLFDVIRREKPDHLAV
CFDKEGSQVRTEMFAEYKANRDATPEPIKEAIPIIQDILNAMHIPVVVLPGCEADDIIGT
LALQAEKENYQVFMVTPDKDFAQLVSENIFMYRPARMGNGIEIWGIPEVQKKFGVERPEQ
VIDFLGMMGDAVDNIPGLPGVGEKTAKKFLKQFGSMEELLANTDQLKGKMKEKVESHAEQ
GILSKKLAAILTDCDVKFHAEDYELSQPDAEKVQEIFEELEFRRLRDQFIKLFSGEEDQP
QTQVTNSPSAKKVSKTAGEGQFSLFGGDNSEKIEASSGGRKSLKDTAHVYQSLKTELSRK
LLLQNLMKQTSVCLDTETTSLNALEAELVGIAFSWEPGKGFYLPFPEEREKAQELIEELR
PFFEDEKIEKIGQNLKYDIKVLAKYNIEIKGKLFDTMIAHYLINPDMRHNMDVLAETYLN
YTPQPISELIGKKGKNQKSMRDVPVEEQTEYGVEDADVTLQLKKFFEQELKEAETRKLFD
EIEIPLVRVLAAMELEGIKLDENFLKSLSDALDSDIKDLEQSIYKEAGEEFKISSPKQLG
LILFEKMELVKKPKKTKTGQYSTSEDVLSVLVKEHKIVEDVLMYRALVKLQNTYVDSLPN
QVQKATGRIHTDYVQTIAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPRDENHILLAAD
YSQIELRIIAALSEEDNMIKAFKEGKDIHASTAAQVFNVNIDEVTREQRSNAKTVNFGII
YGVSAFGLSNQTNLSRAEAKELIDTYYKTYPKLTGYIADQIAFARENGYVQTILGRRRYL
KDINSQNAVVRGAAERNAVNAPIQGSAADIIKLAMINIYRKLTEGKFKTKMLLQVHDELV
FDAHKDEIEEVKKMIQFEMENAYKLDVPLDVELGEGNNWLEAH
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgtctgctcaaaaacgcttattcttactggacgcttacgcgcttattttccgtggttac
tacgcttttataaaaaaccccaggattaattctaaaggctttgatacatcagcaattatg
ggttttatgaattccctttttgatgttattagacgggaaaagccagatcatctagccgtt
tgttttgacaaagaaggcagccaggttagaaccgaaatgtttgctgaatataaagcaaac
cgcgatgctacgccagaaccaataaaagaagctattccaattatccaggatattttaaat
gcgatgcacatcccggtggtagtgcttcccggttgtgaggccgatgatattattggcacc
ctcgccctacaagccgagaaagaaaactaccaggtttttatggtaactccagataaggat
tttgctcaattggtgagcgaaaatatttttatgtaccgcccggcaagaatgggtaacgga
atagaaatttggggcattcccgaagtacagaagaaatttggggttgaacggccggagcaa
gtgatagattttcttggaatgatgggcgacgcggtagataatatacccggacttcccgga
gttggtgaaaaaaccgctaaaaagttcctgaagcaatttggaagtatggaagaattactg
gctaatactgaccagttgaaaggtaagatgaaggagaaagtagaaagtcatgccgagcag
ggaattctttctaaaaaacttgcagctattcttaccgattgtgatgttaaatttcacgct
gaagattacgaactttcgcaacctgatgccgaaaaagtgcaggagatctttgaagaactt
gaattcagaaggttaagagatcaatttataaaattatttagtggcgaagaagatcaacca
caaacccaggtcacaaattctccttcagctaaaaaagtttccaaaactgcaggcgaaggc
cagttttctttgtttggaggtgataattcagaaaaaattgaagccagttctggcggaaga
aaatctttaaaagatacggctcacgtctaccaaagtttaaagactgaattgtccagaaaa
ttattacttcaaaatttaatgaagcaaacaagcgtttgcttagatactgaaaccacaagt
ttaaatgcgctggaagcagagctggtaggtattgcgttttcctgggaacccggtaaaggt
ttttacctgccttttcccgaagaacgagaaaaagcccaggaacttattgaagaattaaga
ccattctttgaagacgaaaaaattgaaaaaattggtcaaaacctaaaatatgacatcaag
gttttagcaaaatataatattgaaataaaaggaaaacttttcgatactatgatcgcgcat
tatttgatcaatccagatatgcgtcataatatggatgtacttgccgaaacttaccttaat
tataccccgcaacctatttcagaattaataggaaaaaaaggaaagaatcagaagtcgatg
cgggatgttccggttgaagaacaaaccgaatatggtgtagaagatgccgatgttaccctt
cagcttaaaaaattctttgaacaggaattaaaagaagcagaaacccgaaagctttttgat
gaaattgaaattccgctagttagagtgcttgccgcaatggaattggaaggcataaaatta
gacgagaatttcctaaaatccctttctgacgcactggatagcgacattaaagatttggag
caaagcatttataaagaagccggggaagaatttaaaataagctctccaaaacaattaggg
cttattctttttgaaaaaatggagttggttaaaaaacccaaaaagaccaaaacaggccaa
tattcaaccagcgaagatgtgctctcggttttagttaaagaacataagatcgtagaggat
gttttaatgtatcgtgcgctggtaaaactccaaaatacctatgtagattcattaccaaac
caggtacaaaaagctaccggcagaattcataccgattatgtgcaaactattgcagctacg
ggaagattgagctccaacaatcctaaccttcaaaatataccgataaggaccgagcgtggt
cgccaggtgagaaaagcttttgttccgcgagacgaaaatcatattctgctggctgccgat
tattctcaaattgaattgcgaattattgcggcgcttagcgaagaagataatatgatcaaa
gctttcaaggaaggtaaagatattcacgcttctaccgccgcccaggtttttaacgtaaat
atagatgaagtaacccgtgagcaaagaagcaacgctaaaactgtaaattttggaattatt
tatggcgtttcagccttcggcttaagcaatcagaccaatttatctcgtgccgaagcaaaa
gaacttattgacacctattacaaaacctatcccaaattaaccggatacattgcagaccag
atagcttttgccagggagaacggttatgttcaaaccattttaggtagaaggcggtattta
aaagatatcaattcacaaaatgcggtagtgcgtggcgctgcagaacgaaatgcggtaaat
gcaccaatacaaggtagcgcagcagatattataaaactggcaatgattaatatttaccga
aaactcacagaaggaaaatttaaaaccaaaatgttactccaggtacatgatgaattggtt
tttgatgctcataaagatgaaattgaagaagtaaagaaaatgattcagtttgaaatggaa
aacgcctacaaactggatgttcctttagacgtagaattaggagaaggcaataactggctg
gaagcacattag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (80)   

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