KEGG   Spiroplasma alleghenense: SALLE_v1c03600
Entry
SALLE_v1c03600    CDS       T06597                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
salx  Spiroplasma alleghenense
Pathway
salx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:salx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SALLE_v1c03600 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salx03021]
    SALLE_v1c03600 (rpoA)
   03400 DNA repair and recombination proteins [BR:salx03400]
    SALLE_v1c03600 (rpoA)
Enzymes [BR:salx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SALLE_v1c03600 (rpoA)
Transcription machinery [BR:salx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SALLE_v1c03600 (rpoA)
DNA repair and recombination proteins [BR:salx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SALLE_v1c03600 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5
Other DBs
NCBI-ProteinID: AXK51034
UniProt: A0A345Z355
Position
412124..413077
AA seq 317 aa
MKQFTKPEFNLLKEEKGKAYGKFMVEPLERGFGITLGNALRRTLLAATPGASVYAIKITG
ASHEFTSINGIVENVSRIILNIKNLVLTINDNIFEDEEVAELKISANTVGEVLAKDIICP
AGVEILNKDLHIATIADGGNLEMILFAKNSRGYRSFKENKKEKLVADAITIDSNYSPIVN
VNYSVDVTKIGRSIDLEKLEIEVETNGSISAADAIAVASKVMVEHLELFVNLNSEISTLE
VIGQADDDDEKELDKMIEDLDFTQRSLNCLKRAQINTLRDLVSRTEDEIQEIRNLGRKSF
KEIKDKVAQLTLNFKQD
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaaacaatttacaaaaccagaatttaatcttctaaaagaggaaaaaggtaaagcttac
ggtaaatttatggtagaaccgctggagagaggttttggaattacattaggtaatgcatta
cgtcgaacacttttagcggcaacaccaggagcaagcgtttatgcaattaaaataacagga
gcatcacacgaatttacttcaattaatgggattgttgaaaatgtaagcagaattatttta
aatattaaaaatttagtactaacaataaatgataacatttttgaagatgaagaagtggcc
gaattaaaaatctcagcaaatacagttggagaggttttagcaaaagatattatttgtcct
gctggagtggaaatccttaataaagatttacatattgcaacaattgctgacggtggtaac
ttagaaatgattttatttgcaaaaaactcaaggggatatcgatcatttaaagaaaataaa
aaagaaaaacttgttgcggatgcaataacaattgattcaaattattcaccaatagtaaat
gtcaattattctgttgatgttactaaaataggtcgttcaatagatcttgaaaagttggaa
atagaagtagaaacaaatggatcaatctcggctgctgatgcaattgctgtagcttctaaa
gttatggttgagcatttagaattatttgtaaatttaaatagcgaaatttcaacattagag
gttataggtcaagctgatgatgacgatgaaaaagaattggacaaaatgattgaagattta
gacttcacacaaagaagtttaaattgcttaaaaagagcacaaataaacactttacgagat
ttagtttcaagaactgaagatgaaattcaagaaattagaaacttaggtcgtaaatcattt
aaagaaattaaggataaagttgctcagttaactttaaactttaaacaggattag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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