KEGG   Salinivibrio sp. YCSC6: E8E00_03790
Entry
E8E00_03790       CDS       T05946                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10912  two-component system, repressor protein LuxO
Organism
saly  Salinivibrio sp. YCSC6
Pathway
saly02020  Two-component system
saly02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:saly00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    E8E00_03790
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E8E00_03790
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:saly02022]
    E8E00_03790
Two-component system [BR:saly02022]
 Lux family
  LuxQN/CqsS-LuxU-LuxO (quorum sensing)
   E8E00_03790
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg HTH_8 AAA_5 Mg_chelatase AAA_16 AAA AAA_2 AAA_19 HTH_30 HTH_23 HTH_29 HTH_7 APS_kinase CsgG nSTAND3 HTH_28
Other DBs
NCBI-ProteinID: QCF37186
Position
I:857417..858829
AA seq 470 aa
MVEDTASVAALYKSYLNPLDVEVEIVGTGQEALNFFAQQGDQLALIILDLRLPDMSGIDV
LAHVRANAPSLPVIIMTAHGSIDAAVDAMRNGANDFLIKPCEADQLRVTVNKSLKPKVAS
QSQSERQEGEYHGFIGRSLPMQAVYRVIESAAPSKATVFITGESGTGKEVCAEAIHAAST
RSNKPIIALNCAAIPKDLIESELFGHVKGAFTGAAAERDGAAELADGGTLFLDEICEMDL
DLQSKLLRFIQTGTFQKVGSSKVKKVDVRFVCATNRDPWLEVQQGKFREDLYYRLHVIPL
ALPPLRDRGSDVLEIANALLALFSAEEGKDFCRFNEAVVKQLLEYDWPGNVRQLQNVIRN
IVVLHNGEEVTAEMLPPPFARASGVEIASSHPNTRSEVALQTLTAREQSDDNLTAISKSD
IEPLWKTEKRAIEVAIDACNGNIPQAAGLLEVSPSTIYRKLQAWQKTAAN
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggtagaagacaccgcgtcagtggctgccctttacaaatcttacctaaacccacttgat
gtggaggtagagatcgttgggacgggtcaggaagcgctgaatttctttgcacaacagggt
gatcagctcgcgctaattatactcgatcttcgtttaccggatatgtcggggatcgacgta
ttggctcatgtccgtgcgaacgcgccaagtttacccgtgatcattatgaccgcgcatggg
tctattgacgcggcggtggatgcgatgcgcaatggcgccaacgattttctgatcaagccg
tgtgaagcagatcaacttagggtgacggtgaataaatcactcaagccaaaagtagcgagt
caatcccagtctgaacggcaagagggagaatatcatggcttcatcggtcgcagtttaccc
atgcaagcggtctatcgagttatagaatcggcggcgcccagtaaagccaccgtctttatt
accggggaaagtggcacgggtaaagaagtgtgtgccgaagccatccatgcggcaagtacg
cgcagcaataaacccattattgccttgaactgtgcggcgattcccaaagacttgattgaa
agtgagctatttggtcacgtgaaaggcgcgtttacaggtgcagcggctgagcgtgatgga
gcagcggagttagcggatggcggcaccttgttcttggatgagatttgcgaaatggatttg
gatttgcaatccaaattgctgcgatttatccaaaccggcacgtttcaaaaagtcggctct
tccaaggtaaaaaaagtggatgtccgttttgtgtgcgccacaaaccgggatccttggtta
gaggttcagcaaggaaagtttcgtgaagatttgtactaccgactccatgtgatccctctc
gcgcttccgccattaagagacagaggcagtgatgtcctagaaattgccaatgccctgttg
gcgctgttttctgccgaggaaggaaaagacttttgtcgctttaatgaggccgttgtaaaa
caactgcttgaatatgattggcccggaaatgttcgtcaacttcagaacgtaatccgcaat
atagtggtgctgcacaatggtgaggaagtcactgccgaaatgcttccacctcctttcgcg
cgcgcatctggtgtcgaaattgcatcgtcccatccgaacactcggtcagaggtggcactg
caaacgttgacggcacgcgaacagagtgatgataacctgactgcaatcagtaaatcggat
atcgaaccgctttggaaaacggaaaaacgtgccattgaagttgcgattgatgcctgtaat
ggcaacattccgcaagcagcaggattattggaagttagcccctcgaccatttatagaaaa
ttacaagcttggcaaaaaactgcggcgaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (18)   
   Pfam (18)   
All databases (25)   

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